27 items (Corvus brachyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N302_00744	Dual specificity protein phosphatase 10. (481 aa)
	N302_02556	Protein tyrosine phosphatase type IVA 1. (173 aa)
	N302_00293	Dual specificity protein phosphatase 15; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (209 aa)
	N302_11524	Dual specificity protein phosphatase 19; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (207 aa)
	N302_13730	Dual specificity protein phosphatase 8. (379 aa)
	N302_06422	Dual specificity protein phosphatase 6. (310 aa)
	N302_10112	Dual specificity protein phosphatase 7. (252 aa)
	N302_01384	Protein phosphatase Slingshot 1. (1039 aa)
	N302_08228	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (148 aa)
	N302_05359	Dual specificity protein phosphatase 1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (186 aa)
	N302_00607	Dual specificity protein phosphatase CDC14A. (574 aa)
	N302_06502	Cyclin-dependent kinase inhibitor 3. (211 aa)
	N302_06507	Serine/threonine/tyrosine-interacting protein. (205 aa)
	N302_12182	Dual specificity protein phosphatase 16. (470 aa)
	N302_10566	Dual specificity protein phosphatase CDC14A. (352 aa)
	N302_13990	Protein tyrosine phosphatase type IVA 2. (170 aa)
	N302_07436	Dual specificity phosphatase DUPD1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (275 aa)
	N302_16429	Serine/threonine/tyrosine-interacting-like 1. (322 aa)
	N302_15579	mRNA-capping enzyme. (579 aa)
	N302_03490	Inactive dual specificity phosphatase 27; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (1166 aa)
	N302_01547	Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1. (135 aa)
	N302_06888	Dual specificity protein phosphatase 22-A. (126 aa)
	N302_03168	Protein phosphatase Slingshot 2. (1320 aa)
	N302_14599	Dual specificity protein phosphatase 5; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (282 aa)
	N302_13278	Laforin. (227 aa)
	N302_04291	Dual specificity protein phosphatase 4. (241 aa)
	N302_06285	Dual specificity protein phosphatase 22. (203 aa)

Your Current Organism:

Corvus brachyrhynchos

NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N302_00607	N302_10566	A0A091EEZ9	A0A091EKP9	Dual specificity protein phosphatase CDC14A.	Dual specificity protein phosphatase CDC14A.	0.924
N302_00607	N302_13278	A0A091EEZ9	A0A091EWA2	Dual specificity protein phosphatase CDC14A.	Laforin.	0.435
N302_00744	N302_06422	A0A091EHV5	A0A091EC24	Dual specificity protein phosphatase 10.	Dual specificity protein phosphatase 6.	0.533
N302_00744	N302_10112	A0A091EHV5	A0A091ELQ6	Dual specificity protein phosphatase 10.	Dual specificity protein phosphatase 7.	0.533
N302_00744	N302_12182	A0A091EHV5	A0A091EJX8	Dual specificity protein phosphatase 10.	Dual specificity protein phosphatase 16.	0.566
N302_00744	N302_13730	A0A091EHV5	A0A091EBZ5	Dual specificity protein phosphatase 10.	Dual specificity protein phosphatase 8.	0.566
N302_01384	N302_03168	A0A091ES94	A0A091ESV8	Protein phosphatase Slingshot 1.	Protein phosphatase Slingshot 2.	0.928
N302_03168	N302_01384	A0A091ESV8	A0A091ES94	Protein phosphatase Slingshot 2.	Protein phosphatase Slingshot 1.	0.928
N302_04291	N302_06422	A0A091EWI1	A0A091EC24	Dual specificity protein phosphatase 4.	Dual specificity protein phosphatase 6.	0.480
N302_04291	N302_10112	A0A091EWI1	A0A091ELQ6	Dual specificity protein phosphatase 4.	Dual specificity protein phosphatase 7.	0.461
N302_05359	N302_06422	A0A091EC90	A0A091EC24	Dual specificity protein phosphatase 1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase 6.	0.471
N302_05359	N302_10112	A0A091EC90	A0A091ELQ6	Dual specificity protein phosphatase 1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase 7.	0.476
N302_06422	N302_00744	A0A091EC24	A0A091EHV5	Dual specificity protein phosphatase 6.	Dual specificity protein phosphatase 10.	0.533
N302_06422	N302_04291	A0A091EC24	A0A091EWI1	Dual specificity protein phosphatase 6.	Dual specificity protein phosphatase 4.	0.480
N302_06422	N302_05359	A0A091EC24	A0A091EC90	Dual specificity protein phosphatase 6.	Dual specificity protein phosphatase 1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.471
N302_06422	N302_12182	A0A091EC24	A0A091EJX8	Dual specificity protein phosphatase 6.	Dual specificity protein phosphatase 16.	0.537
N302_06422	N302_13278	A0A091EC24	A0A091EWA2	Dual specificity protein phosphatase 6.	Laforin.	0.414
N302_06422	N302_13730	A0A091EC24	A0A091EBZ5	Dual specificity protein phosphatase 6.	Dual specificity protein phosphatase 8.	0.537
N302_06502	N302_07436	A0A091EZA3	A0A091F9W0	Cyclin-dependent kinase inhibitor 3.	Dual specificity phosphatase DUPD1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.483
N302_06502	N302_08228	A0A091EZA3	A0A091E364	Cyclin-dependent kinase inhibitor 3.	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.463