22 items (Corvus brachyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N302_04854	Phosphodiesterase. (822 aa)
	N302_09243	COP9 signalosome complex subunit 1. (476 aa)
	N302_01191	Cleavage and polyadenylation specificity factor subunit 7. (453 aa)
	N302_07831	RNA-binding Raly-like. (205 aa)
	N302_15370	Transformer-2 protein alpha. (256 aa)
	N302_05507	Msx2-interacting protein. (112 aa)
	N302_05774	RNA-binding motif protein, X chromosome. (391 aa)
	N302_07366	Rho-related BTB domain-containing protein 1. (688 aa)
	N302_11730	E3 ubiquitin-protein ligase RBBP6. (936 aa)
	N302_06106	COP9 signalosome complex subunit 4. (382 aa)
	N302_01881	Rho-associated protein kinase 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1418 aa)
	N302_05509	Msx2-interacting protein. (263 aa)
	N302_10395	Splicing factor, arginine/serine-rich 15. (1067 aa)
	N302_13779	Transformer-2 protein beta. (275 aa)
	N302_15406	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (73 aa)
	N302_02514	Cullin-3; Belongs to the cullin family. (746 aa)
	N302_13405	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (465 aa)
	N302_07865	Thioredoxin-like 1. (271 aa)
	N302_02228	RNA-binding protein Raly. (270 aa)
	N302_01007	Rho-associated protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1339 aa)
	N302_08831	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family. (535 aa)
	N302_05649	Cold-inducible RNA-binding protein. (166 aa)

Your Current Organism:

Corvus brachyrhynchos

NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N302_01007	N302_01881	A0A091FJM2	A0A091F7N6	Rho-associated protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Rho-associated protein kinase 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.978
N302_01007	N302_07366	A0A091FJM2	A0A091FBP6	Rho-associated protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Rho-related BTB domain-containing protein 1.	0.712
N302_01191	N302_02228	A0A091EGS3	A0A091FDA0	Cleavage and polyadenylation specificity factor subunit 7.	RNA-binding protein Raly.	0.404
N302_01191	N302_07366	A0A091EGS3	A0A091FBP6	Cleavage and polyadenylation specificity factor subunit 7.	Rho-related BTB domain-containing protein 1.	0.553
N302_01191	N302_11730	A0A091EGS3	A0A091FAT6	Cleavage and polyadenylation specificity factor subunit 7.	E3 ubiquitin-protein ligase RBBP6.	0.423
N302_01881	N302_01007	A0A091F7N6	A0A091FJM2	Rho-associated protein kinase 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Rho-associated protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.978
N302_01881	N302_07366	A0A091F7N6	A0A091FBP6	Rho-associated protein kinase 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Rho-related BTB domain-containing protein 1.	0.712
N302_02228	N302_01191	A0A091FDA0	A0A091EGS3	RNA-binding protein Raly.	Cleavage and polyadenylation specificity factor subunit 7.	0.404
N302_02228	N302_05649	A0A091FDA0	A0A091FU46	RNA-binding protein Raly.	Cold-inducible RNA-binding protein.	0.805
N302_02228	N302_05774	A0A091FDA0	A0A091E6I7	RNA-binding protein Raly.	RNA-binding motif protein, X chromosome.	0.805
N302_02228	N302_07366	A0A091FDA0	A0A091FBP6	RNA-binding protein Raly.	Rho-related BTB domain-containing protein 1.	0.593
N302_02228	N302_07831	A0A091FDA0	A0A091EGX9	RNA-binding protein Raly.	RNA-binding Raly-like.	0.911
N302_02228	N302_08831	A0A091FDA0	A0A091EPD7	RNA-binding protein Raly.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.484
N302_02228	N302_13405	A0A091FDA0	A0A091F0Q9	RNA-binding protein Raly.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.454
N302_02228	N302_13779	A0A091FDA0	A0A091F372	RNA-binding protein Raly.	Transformer-2 protein beta.	0.724
N302_02228	N302_15370	A0A091FDA0	A0A091EH61	RNA-binding protein Raly.	Transformer-2 protein alpha.	0.724
N302_02228	N302_15406	A0A091FDA0	A0A091EWJ0	RNA-binding protein Raly.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.518
N302_02514	N302_06106	A0A091EXL0	A0A091F8J8	Cullin-3; Belongs to the cullin family.	COP9 signalosome complex subunit 4.	0.910
N302_02514	N302_07366	A0A091EXL0	A0A091FBP6	Cullin-3; Belongs to the cullin family.	Rho-related BTB domain-containing protein 1.	0.877
N302_02514	N302_07865	A0A091EXL0	A0A091EZS3	Cullin-3; Belongs to the cullin family.	Thioredoxin-like 1.	0.467