40 items (Corvus brachyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N302_05988	Kelch-like 6. (610 aa)
	N302_06054	Kelch-like 8. (616 aa)
	N302_05590	Ectoderm-neural cortex protein 1. (588 aa)
	N302_03582	BTB domain-containing protein. (606 aa)
	N302_07470	Kelch-like 38. (580 aa)
	N302_04413	Kelch-like 40. (617 aa)
	N302_12376	Kelch-like 3. (582 aa)
	N302_10188	Kelch repeat and BTB domain-containing protein 12. (563 aa)
	N302_01922	Kelch-like 29. (561 aa)
	N302_11447	Actin-binding protein IPP. (570 aa)
	N302_14249	Kelch-like 17. (514 aa)
	N302_16316	Kelch-like 25. (589 aa)
	N302_03610	Kelch-like 26. (379 aa)
	N302_11264	Ectoderm-neural cortex protein 1. (589 aa)
	N302_06898	Kelch-like 36. (597 aa)
	N302_04376	Kelch-like 2. (594 aa)
	N302_02709	Kelch-like 32. (613 aa)
	N302_02578	Kelch-like 31. (634 aa)
	N302_14178	Kelch-like 12. (556 aa)
	N302_06916	Gigaxonin. (544 aa)
	N302_02447	Kelch-like 23. (478 aa)
	N302_06778	Kelch-like 23. (558 aa)
	N302_09989	Kelch-like 21. (323 aa)
	N302_16036	Kelch repeat and BTB domain-containing protein 2. (454 aa)
	N302_09574	Kelch-like 13. (655 aa)
	N302_13947	Kelch-like 31. (570 aa)
	N302_06783	Kelch-like 41. (606 aa)
	N302_14654	Kelch-like 1. (569 aa)
	N302_15375	Kelch-like 7. (546 aa)
	N302_01103	Kelch-like 15. (604 aa)
	N302_05975	Kelch-like 30. (529 aa)
	N302_00493	Kelch-like 20. (602 aa)
	N302_05989	Kelch-like 24. (604 aa)
	N302_01117	Kelch-like 34. (583 aa)
	N302_04475	Kelch domain-containing protein 10. (358 aa)
	N302_05793	Kelch-like 4. (671 aa)
	N302_14783	Kelch domain-containing protein 8A. (287 aa)
	N302_15806	Kelch repeat and BTB domain-containing protein 8. (587 aa)
	N302_08184	Kelch-like 11. (535 aa)
	N302_05003	Kelch repeat and BTB domain-containing protein 13. (406 aa)

Your Current Organism:

Corvus brachyrhynchos

NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N302_00493	N302_01117	A0A091EEN4	A0A091ECN4	Kelch-like 20.	Kelch-like 34.	0.531
N302_00493	N302_02447	A0A091EEN4	A0A091EVD2	Kelch-like 20.	Kelch-like 23.	0.493
N302_00493	N302_02578	A0A091EEN4	A0A091F044	Kelch-like 20.	Kelch-like 31.	0.558
N302_00493	N302_03610	A0A091EEN4	A0A091F3N5	Kelch-like 20.	Kelch-like 26.	0.531
N302_00493	N302_04376	A0A091EEN4	A0A091F0X7	Kelch-like 20.	Kelch-like 2.	0.507
N302_00493	N302_04413	A0A091EEN4	A0A091FAB7	Kelch-like 20.	Kelch-like 40.	0.419
N302_00493	N302_05003	A0A091EEN4	A0A091E5U1	Kelch-like 20.	Kelch repeat and BTB domain-containing protein 13.	0.568
N302_00493	N302_05590	A0A091EEN4	A0A091FU03	Kelch-like 20.	Ectoderm-neural cortex protein 1.	0.521
N302_00493	N302_05793	A0A091EEN4	A0A091EBD5	Kelch-like 20.	Kelch-like 4.	0.471
N302_00493	N302_05975	A0A091EEN4	A0A091EFT6	Kelch-like 20.	Kelch-like 30.	0.454
N302_00493	N302_06054	A0A091EEN4	A0A091FUF4	Kelch-like 20.	Kelch-like 8.	0.424
N302_00493	N302_06916	A0A091EEN4	A0A091EYM2	Kelch-like 20.	Gigaxonin.	0.542
N302_00493	N302_08184	A0A091EEN4	A0A091E7K7	Kelch-like 20.	Kelch-like 11.	0.608
N302_00493	N302_09574	A0A091EEN4	A0A091ERN1	Kelch-like 20.	Kelch-like 13.	0.531
N302_00493	N302_09989	A0A091EEN4	A0A091ESR0	Kelch-like 20.	Kelch-like 21.	0.575
N302_00493	N302_11264	A0A091EEN4	A0A091F2X1	Kelch-like 20.	Ectoderm-neural cortex protein 1.	0.521
N302_00493	N302_11447	A0A091EEN4	A0A091F6R0	Kelch-like 20.	Actin-binding protein IPP.	0.478
N302_00493	N302_12376	A0A091EEN4	A0A091F8U3	Kelch-like 20.	Kelch-like 3.	0.506
N302_00493	N302_13947	A0A091EEN4	A0A091EQN7	Kelch-like 20.	Kelch-like 31.	0.562
N302_00493	N302_14178	A0A091EEN4	A0A091EZR2	Kelch-like 20.	Kelch-like 12.	0.493