STRINGSTRING
bga_1 bga_1 bga_2 bga_2 bga_3 bga_3 nedA_2 nedA_2 nedA_3 nedA_3 agaA_3 agaA_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bga_1Beta-galactosidase precursor; Belongs to the glycosyl hydrolase 35 family. (1009 aa)
bga_2Beta-galactosidase precursor; Belongs to the glycosyl hydrolase 35 family. (789 aa)
bga_3Beta-galactosidase precursor. (586 aa)
nedA_2Sialidase precursor. (636 aa)
nedA_3Sialidase precursor. (359 aa)
agaA_3Alpha-galactosidase A precursor. (548 aa)
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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