STRINGSTRING
pksE pksE arcC1 arcC1 dauA_1 dauA_1 cynT_2 cynT_2 cynT_1 cynT_1 T45_00530 T45_00530 nirD nirD nasD nasD nasB nasB puuA puuA T45_06156 T45_06156 glnA_3 glnA_3 dauA_3 dauA_3 gltB_2 gltB_2 gltB_1 gltB_1 mtcA1_1 mtcA1_1 T45_03738 T45_03738 glnA_2 glnA_2 glnA_1 glnA_1 T45_03193 T45_03193 sulP sulP gdhB_3 gdhB_3 glnA_4 glnA_4 T45_08196 T45_08196 ssuC_4 ssuC_4 mtcA2 mtcA2 T45_08616 T45_08616 T45_08619 T45_08619 glnII glnII glnA_5 glnA_5 mtcA1_2 mtcA1_2 gltB_3 gltB_3 narK narK dauA_2 dauA_2 T45_05200 T45_05200 gdhA gdhA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pksEPolyketide biosynthesis protein PksE. (552 aa)
arcC1Carbamate kinase 1; Belongs to the carbamate kinase family. (308 aa)
dauA_1C4-dicarboxylic acid transporter DauA. (492 aa)
cynT_2Carbonic anhydrase 1; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (196 aa)
cynT_1Carbonic anhydrase 1. (814 aa)
T45_00530Nitronate monooxygenase. (341 aa)
nirDNitrite reductase (NADH) small subunit. (123 aa)
nasDNitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (872 aa)
nasBAssimilatory nitrate reductase electron transfer subunit. (424 aa)
puuAGamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family. (461 aa)
T45_06156Barstar; Barnase inhibitor. (96 aa)
glnA_3Putative glutamine synthetase 2. (453 aa)
dauA_3C4-dicarboxylic acid transporter DauA. (504 aa)
gltB_2Glutamate synthase [NADPH] small chain. (486 aa)
gltB_1Glutamate synthase [NADPH] large chain. (1541 aa)
mtcA1_1Beta-carbonic anhydrase 1. (202 aa)
T45_03738F5/8 type C domain protein. (690 aa)
glnA_2Glutamine synthetase. (456 aa)
glnA_1Putative glutamine synthetase 2. (456 aa)
T45_03193Nitrilase. (304 aa)
sulPPutative sulfate transporter/MT1781. (573 aa)
gdhB_3NAD-specific glutamate dehydrogenase. (1651 aa)
glnA_4Glutamine synthetase. (454 aa)
T45_08196Barstar; Barnase inhibitor. (137 aa)
ssuC_4Putative aliphatic sulfonates transport permease protein SsuC. (260 aa)
mtcA2Carbonic anhydrase 2. (293 aa)
T45_08616Membrane dipeptidase (peptidase family M19). (395 aa)
T45_08619Membrane dipeptidase (peptidase family M19). (382 aa)
glnIIGlutamine synthetase 2. (342 aa)
glnA_5Glutamine synthetase. (469 aa)
mtcA1_2Beta-carbonic anhydrase 1. (184 aa)
gltB_3Glutamate synthase [NADPH] small chain. (495 aa)
narKNitrate/nitrite transporter NarK. (461 aa)
dauA_2C4-dicarboxylic acid transporter DauA. (610 aa)
T45_05200Nitronate monooxygenase. (375 aa)
gdhAGlutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (396 aa)
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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