6 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4S7W5_9ROSI	Pectinesterase. (343 aa)
	V4SNJ3_9ROSI	Uncharacterized protein. (400 aa)
	V4TAT8_9ROSI	PMEI domain-containing protein; In the C-terminal section; belongs to the pectinesterase family. (727 aa)
	V4TCS5_9ROSI	Pectate lyase. (331 aa)
	V4UJ53_9ROSI	Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family. (525 aa)
	V4VJL1_9ROSI	Pectate lyase. (437 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4S7W5_9ROSI	V4SNJ3_9ROSI	V4S7W5	V4SNJ3	Pectinesterase.	Uncharacterized protein.	0.743
V4S7W5_9ROSI	V4TCS5_9ROSI	V4S7W5	V4TCS5	Pectinesterase.	Pectate lyase.	0.744
V4S7W5_9ROSI	V4VJL1_9ROSI	V4S7W5	V4VJL1	Pectinesterase.	Pectate lyase.	0.655
V4SNJ3_9ROSI	V4S7W5_9ROSI	V4SNJ3	V4S7W5	Uncharacterized protein.	Pectinesterase.	0.743
V4SNJ3_9ROSI	V4TAT8_9ROSI	V4SNJ3	V4TAT8	Uncharacterized protein.	PMEI domain-containing protein; In the C-terminal section; belongs to the pectinesterase family.	0.758
V4SNJ3_9ROSI	V4TCS5_9ROSI	V4SNJ3	V4TCS5	Uncharacterized protein.	Pectate lyase.	0.747
V4SNJ3_9ROSI	V4UJ53_9ROSI	V4SNJ3	V4UJ53	Uncharacterized protein.	Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.	0.734
V4SNJ3_9ROSI	V4VJL1_9ROSI	V4SNJ3	V4VJL1	Uncharacterized protein.	Pectate lyase.	0.705
V4TAT8_9ROSI	V4SNJ3_9ROSI	V4TAT8	V4SNJ3	PMEI domain-containing protein; In the C-terminal section; belongs to the pectinesterase family.	Uncharacterized protein.	0.758
V4TAT8_9ROSI	V4TCS5_9ROSI	V4TAT8	V4TCS5	PMEI domain-containing protein; In the C-terminal section; belongs to the pectinesterase family.	Pectate lyase.	0.753
V4TAT8_9ROSI	V4VJL1_9ROSI	V4TAT8	V4VJL1	PMEI domain-containing protein; In the C-terminal section; belongs to the pectinesterase family.	Pectate lyase.	0.679
V4TCS5_9ROSI	V4S7W5_9ROSI	V4TCS5	V4S7W5	Pectate lyase.	Pectinesterase.	0.744
V4TCS5_9ROSI	V4SNJ3_9ROSI	V4TCS5	V4SNJ3	Pectate lyase.	Uncharacterized protein.	0.747
V4TCS5_9ROSI	V4TAT8_9ROSI	V4TCS5	V4TAT8	Pectate lyase.	PMEI domain-containing protein; In the C-terminal section; belongs to the pectinesterase family.	0.753
V4TCS5_9ROSI	V4UJ53_9ROSI	V4TCS5	V4UJ53	Pectate lyase.	Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.	0.776
V4UJ53_9ROSI	V4SNJ3_9ROSI	V4UJ53	V4SNJ3	Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.	Uncharacterized protein.	0.734
V4UJ53_9ROSI	V4TCS5_9ROSI	V4UJ53	V4TCS5	Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.	Pectate lyase.	0.776
V4UJ53_9ROSI	V4VJL1_9ROSI	V4UJ53	V4VJL1	Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.	Pectate lyase.	0.666
V4VJL1_9ROSI	V4S7W5_9ROSI	V4VJL1	V4S7W5	Pectate lyase.	Pectinesterase.	0.655
V4VJL1_9ROSI	V4SNJ3_9ROSI	V4VJL1	V4SNJ3	Pectate lyase.	Uncharacterized protein.	0.705