14 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4RRA1_9ROSI	PCNA_C domain-containing protein. (113 aa)
	V4S164_9ROSI	Protein kinase domain-containing protein. (256 aa)
	V4SF43_9ROSI	CBFD_NFYB_HMF domain-containing protein. (143 aa)
	V4SFA7_9ROSI	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2206 aa)
	V4SQ01_9ROSI	DNA polymerase. (1513 aa)
	V4SV79_9ROSI	Protein kinase domain-containing protein. (289 aa)
	V4SXG4_9ROSI	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (451 aa)
	V4T1L9_9ROSI	Uncharacterized protein. (1434 aa)
	V4T327_9ROSI	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
	V4TEH1_9ROSI	Uncharacterized protein. (352 aa)
	V4TIA0_9ROSI	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (620 aa)
	V4TN43_9ROSI	Uncharacterized protein. (453 aa)
	V4TXU7_9ROSI	Uncharacterized protein. (621 aa)
	V4TYR3_9ROSI	Uncharacterized protein. (955 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RRA1_9ROSI	V4S164_9ROSI	V4RRA1	V4S164	PCNA_C domain-containing protein.	Protein kinase domain-containing protein.	0.955
V4RRA1_9ROSI	V4SF43_9ROSI	V4RRA1	V4SF43	PCNA_C domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.760
V4RRA1_9ROSI	V4SFA7_9ROSI	V4RRA1	V4SFA7	PCNA_C domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.979
V4RRA1_9ROSI	V4SQ01_9ROSI	V4RRA1	V4SQ01	PCNA_C domain-containing protein.	DNA polymerase.	0.962
V4RRA1_9ROSI	V4SV79_9ROSI	V4RRA1	V4SV79	PCNA_C domain-containing protein.	Protein kinase domain-containing protein.	0.955
V4RRA1_9ROSI	V4SXG4_9ROSI	V4RRA1	V4SXG4	PCNA_C domain-containing protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.954
V4RRA1_9ROSI	V4T1L9_9ROSI	V4RRA1	V4T1L9	PCNA_C domain-containing protein.	Uncharacterized protein.	0.636
V4RRA1_9ROSI	V4T327_9ROSI	V4RRA1	V4T327	PCNA_C domain-containing protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.800
V4RRA1_9ROSI	V4TEH1_9ROSI	V4RRA1	V4TEH1	PCNA_C domain-containing protein.	Uncharacterized protein.	0.661
V4RRA1_9ROSI	V4TIA0_9ROSI	V4RRA1	V4TIA0	PCNA_C domain-containing protein.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.931
V4RRA1_9ROSI	V4TN43_9ROSI	V4RRA1	V4TN43	PCNA_C domain-containing protein.	Uncharacterized protein.	0.949
V4RRA1_9ROSI	V4TXU7_9ROSI	V4RRA1	V4TXU7	PCNA_C domain-containing protein.	Uncharacterized protein.	0.968
V4RRA1_9ROSI	V4TYR3_9ROSI	V4RRA1	V4TYR3	PCNA_C domain-containing protein.	Uncharacterized protein.	0.661
V4S164_9ROSI	V4RRA1_9ROSI	V4S164	V4RRA1	Protein kinase domain-containing protein.	PCNA_C domain-containing protein.	0.955
V4S164_9ROSI	V4SF43_9ROSI	V4S164	V4SF43	Protein kinase domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.918
V4S164_9ROSI	V4SFA7_9ROSI	V4S164	V4SFA7	Protein kinase domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.954
V4S164_9ROSI	V4SQ01_9ROSI	V4S164	V4SQ01	Protein kinase domain-containing protein.	DNA polymerase.	0.895
V4S164_9ROSI	V4SXG4_9ROSI	V4S164	V4SXG4	Protein kinase domain-containing protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.973
V4S164_9ROSI	V4T1L9_9ROSI	V4S164	V4T1L9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.889
V4S164_9ROSI	V4T327_9ROSI	V4S164	V4T327	Protein kinase domain-containing protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.958