5 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4SDP5_9ROSI	Uncharacterized protein. (594 aa)
	V4T2V7_9ROSI	AAA domain-containing protein. (364 aa)
	V4TCV9_9ROSI	AAA domain-containing protein. (382 aa)
	V4TEJ0_9ROSI	Uncharacterized protein. (742 aa)
	V4VLY3_9ROSI	AAA domain-containing protein. (331 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4SDP5_9ROSI	V4T2V7_9ROSI	V4SDP5	V4T2V7	Uncharacterized protein.	AAA domain-containing protein.	0.994
V4SDP5_9ROSI	V4TCV9_9ROSI	V4SDP5	V4TCV9	Uncharacterized protein.	AAA domain-containing protein.	0.961
V4SDP5_9ROSI	V4TEJ0_9ROSI	V4SDP5	V4TEJ0	Uncharacterized protein.	Uncharacterized protein.	0.973
V4SDP5_9ROSI	V4VLY3_9ROSI	V4SDP5	V4VLY3	Uncharacterized protein.	AAA domain-containing protein.	0.994
V4T2V7_9ROSI	V4SDP5_9ROSI	V4T2V7	V4SDP5	AAA domain-containing protein.	Uncharacterized protein.	0.994
V4T2V7_9ROSI	V4TCV9_9ROSI	V4T2V7	V4TCV9	AAA domain-containing protein.	AAA domain-containing protein.	0.983
V4T2V7_9ROSI	V4TEJ0_9ROSI	V4T2V7	V4TEJ0	AAA domain-containing protein.	Uncharacterized protein.	0.980
V4T2V7_9ROSI	V4VLY3_9ROSI	V4T2V7	V4VLY3	AAA domain-containing protein.	AAA domain-containing protein.	0.997
V4TCV9_9ROSI	V4SDP5_9ROSI	V4TCV9	V4SDP5	AAA domain-containing protein.	Uncharacterized protein.	0.961
V4TCV9_9ROSI	V4T2V7_9ROSI	V4TCV9	V4T2V7	AAA domain-containing protein.	AAA domain-containing protein.	0.983
V4TCV9_9ROSI	V4TEJ0_9ROSI	V4TCV9	V4TEJ0	AAA domain-containing protein.	Uncharacterized protein.	0.933
V4TCV9_9ROSI	V4VLY3_9ROSI	V4TCV9	V4VLY3	AAA domain-containing protein.	AAA domain-containing protein.	0.997
V4TEJ0_9ROSI	V4SDP5_9ROSI	V4TEJ0	V4SDP5	Uncharacterized protein.	Uncharacterized protein.	0.973
V4TEJ0_9ROSI	V4T2V7_9ROSI	V4TEJ0	V4T2V7	Uncharacterized protein.	AAA domain-containing protein.	0.980
V4TEJ0_9ROSI	V4TCV9_9ROSI	V4TEJ0	V4TCV9	Uncharacterized protein.	AAA domain-containing protein.	0.933
V4TEJ0_9ROSI	V4VLY3_9ROSI	V4TEJ0	V4VLY3	Uncharacterized protein.	AAA domain-containing protein.	0.980
V4VLY3_9ROSI	V4SDP5_9ROSI	V4VLY3	V4SDP5	AAA domain-containing protein.	Uncharacterized protein.	0.994
V4VLY3_9ROSI	V4T2V7_9ROSI	V4VLY3	V4T2V7	AAA domain-containing protein.	AAA domain-containing protein.	0.997
V4VLY3_9ROSI	V4TCV9_9ROSI	V4VLY3	V4TCV9	AAA domain-containing protein.	AAA domain-containing protein.	0.997
V4VLY3_9ROSI	V4TEJ0_9ROSI	V4VLY3	V4TEJ0	AAA domain-containing protein.	Uncharacterized protein.	0.980