(10 nodes) Mixed, incl. Ribosomal protein L25, and L28p-like network (Citrus clementina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4RUQ3_9ROSI	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (125 aa)
	V4S8S2_9ROSI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (363 aa)
	V4SJP9_9ROSI	Ribosomal_TL5_C domain-containing protein. (241 aa)
	V4SXS2_9ROSI	Ribosomal_TL5_C domain-containing protein. (258 aa)
	V4TF33_9ROSI	Uncharacterized protein. (173 aa)
	V4TNF2_9ROSI	Uncharacterized protein. (243 aa)
	V4U330_9ROSI	Uncharacterized protein. (192 aa)
	V4UL75_9ROSI	Uncharacterized protein. (149 aa)
	V4UM17_9ROSI	Uncharacterized protein. (222 aa)
	V4W8N2_9ROSI	Uncharacterized protein. (251 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RUQ3_9ROSI	V4S8S2_9ROSI	V4RUQ3	V4S8S2	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.993
V4RUQ3_9ROSI	V4SJP9_9ROSI	V4RUQ3	V4SJP9	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Ribosomal_TL5_C domain-containing protein.	0.991
V4RUQ3_9ROSI	V4SXS2_9ROSI	V4RUQ3	V4SXS2	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Ribosomal_TL5_C domain-containing protein.	0.986
V4RUQ3_9ROSI	V4TF33_9ROSI	V4RUQ3	V4TF33	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Uncharacterized protein.	0.999
V4RUQ3_9ROSI	V4TNF2_9ROSI	V4RUQ3	V4TNF2	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Uncharacterized protein.	0.994
V4RUQ3_9ROSI	V4U330_9ROSI	V4RUQ3	V4U330	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Uncharacterized protein.	0.993
V4RUQ3_9ROSI	V4UL75_9ROSI	V4RUQ3	V4UL75	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Uncharacterized protein.	0.999
V4RUQ3_9ROSI	V4UM17_9ROSI	V4RUQ3	V4UM17	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Uncharacterized protein.	0.988
V4RUQ3_9ROSI	V4W8N2_9ROSI	V4RUQ3	V4W8N2	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Uncharacterized protein.	0.994
V4S8S2_9ROSI	V4RUQ3_9ROSI	V4S8S2	V4RUQ3	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.993
V4S8S2_9ROSI	V4SJP9_9ROSI	V4S8S2	V4SJP9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal_TL5_C domain-containing protein.	0.992
V4S8S2_9ROSI	V4SXS2_9ROSI	V4S8S2	V4SXS2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal_TL5_C domain-containing protein.	0.984
V4S8S2_9ROSI	V4TF33_9ROSI	V4S8S2	V4TF33	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.991
V4S8S2_9ROSI	V4TNF2_9ROSI	V4S8S2	V4TNF2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.974
V4S8S2_9ROSI	V4U330_9ROSI	V4S8S2	V4U330	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.974
V4S8S2_9ROSI	V4UL75_9ROSI	V4S8S2	V4UL75	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.997
V4S8S2_9ROSI	V4UM17_9ROSI	V4S8S2	V4UM17	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.983
V4S8S2_9ROSI	V4W8N2_9ROSI	V4S8S2	V4W8N2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.976
V4SJP9_9ROSI	V4RUQ3_9ROSI	V4SJP9	V4RUQ3	Ribosomal_TL5_C domain-containing protein.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.991
V4SJP9_9ROSI	V4S8S2_9ROSI	V4SJP9	V4S8S2	Ribosomal_TL5_C domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.992