15 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4RSA9_9ROSI	CN hydrolase domain-containing protein. (301 aa)
	V4S998_9ROSI	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family. (328 aa)
	V4SQ40_9ROSI	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (381 aa)
	V4SS93_9ROSI	Amino_oxidase domain-containing protein. (493 aa)
	V4TFW4_9ROSI	Amino_oxidase domain-containing protein. (496 aa)
	V4TI30_9ROSI	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family. (319 aa)
	V4TJA9_9ROSI	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family. (345 aa)
	V4TL04_9ROSI	Uncharacterized protein. (381 aa)
	V4U1H5_9ROSI	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (428 aa)
	V4U4M3_9ROSI	Amino_oxidase domain-containing protein. (485 aa)
	V4U8J5_9ROSI	Uncharacterized protein; Belongs to the arginase family. (339 aa)
	V4U9Z2_9ROSI	Amino_oxidase domain-containing protein. (307 aa)
	V4UHI5_9ROSI	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (484 aa)
	V4UKF2_9ROSI	Amino_oxidase domain-containing protein. (569 aa)
	V4VJX6_9ROSI	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (538 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RSA9_9ROSI	V4S998_9ROSI	V4RSA9	V4S998	CN hydrolase domain-containing protein.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.955
V4RSA9_9ROSI	V4SQ40_9ROSI	V4RSA9	V4SQ40	CN hydrolase domain-containing protein.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.920
V4RSA9_9ROSI	V4SS93_9ROSI	V4RSA9	V4SS93	CN hydrolase domain-containing protein.	Amino_oxidase domain-containing protein.	0.931
V4RSA9_9ROSI	V4TI30_9ROSI	V4RSA9	V4TI30	CN hydrolase domain-containing protein.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.944
V4RSA9_9ROSI	V4TJA9_9ROSI	V4RSA9	V4TJA9	CN hydrolase domain-containing protein.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.958
V4RSA9_9ROSI	V4TL04_9ROSI	V4RSA9	V4TL04	CN hydrolase domain-containing protein.	Uncharacterized protein.	0.996
V4RSA9_9ROSI	V4U1H5_9ROSI	V4RSA9	V4U1H5	CN hydrolase domain-containing protein.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.920
V4RSA9_9ROSI	V4U8J5_9ROSI	V4RSA9	V4U8J5	CN hydrolase domain-containing protein.	Uncharacterized protein; Belongs to the arginase family.	0.485
V4S998_9ROSI	V4RSA9_9ROSI	V4S998	V4RSA9	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	CN hydrolase domain-containing protein.	0.955
V4S998_9ROSI	V4SQ40_9ROSI	V4S998	V4SQ40	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.984
V4S998_9ROSI	V4SS93_9ROSI	V4S998	V4SS93	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Amino_oxidase domain-containing protein.	0.953
V4S998_9ROSI	V4TFW4_9ROSI	V4S998	V4TFW4	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Amino_oxidase domain-containing protein.	0.933
V4S998_9ROSI	V4TI30_9ROSI	V4S998	V4TI30	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.903
V4S998_9ROSI	V4TJA9_9ROSI	V4S998	V4TJA9	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.924
V4S998_9ROSI	V4TL04_9ROSI	V4S998	V4TL04	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Uncharacterized protein.	0.585
V4S998_9ROSI	V4U1H5_9ROSI	V4S998	V4U1H5	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.984
V4S998_9ROSI	V4U4M3_9ROSI	V4S998	V4U4M3	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Amino_oxidase domain-containing protein.	0.933
V4S998_9ROSI	V4U8J5_9ROSI	V4S998	V4U8J5	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Uncharacterized protein; Belongs to the arginase family.	0.824
V4S998_9ROSI	V4U9Z2_9ROSI	V4S998	V4U9Z2	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Amino_oxidase domain-containing protein.	0.933
V4S998_9ROSI	V4UKF2_9ROSI	V4S998	V4UKF2	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Amino_oxidase domain-containing protein.	0.945