51 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4SGA2_9ROSI	Uncharacterized protein. (233 aa)
	V4SGM4_9ROSI	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1041 aa)
	V4WE54_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (653 aa)
	V4W6U5_9ROSI	UmuC domain-containing protein. (732 aa)
	V4VRF5_9ROSI	SAP domain-containing protein. (623 aa)
	V4V812_9ROSI	ENDO3c domain-containing protein. (373 aa)
	V4V3P2_9ROSI	Uncharacterized protein. (199 aa)
	V4UUB8_9ROSI	SAM domain-containing protein. (700 aa)
	V4UTM8_9ROSI	FHA domain-containing protein. (206 aa)
	V4ULR1_9ROSI	BRCT domain-containing protein. (402 aa)
	V4UEH5_9ROSI	Uncharacterized protein. (237 aa)
	V4UAI5_9ROSI	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (456 aa)
	V4UA55_9ROSI	Uncharacterized protein. (129 aa)
	V4U982_9ROSI	DRMBL domain-containing protein. (473 aa)
	V4U6J9_9ROSI	AAA_23 domain-containing protein. (484 aa)
	V4TZX9_9ROSI	Helicase ATP-binding domain-containing protein. (759 aa)
	V4TY21_9ROSI	Ku domain-containing protein. (736 aa)
	V4TW55_9ROSI	Rep-A_N domain-containing protein. (119 aa)
	V4TQK0_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (623 aa)
	V4TNY2_9ROSI	ERCC4 domain-containing protein. (1220 aa)
	V4TJR6_9ROSI	DRMBL domain-containing protein. (315 aa)
	V4TI78_9ROSI	Lactamase_B domain-containing protein. (464 aa)
	V4TH20_9ROSI	Uncharacterized protein. (390 aa)
	V4SBB0_9ROSI	Uncharacterized protein. (162 aa)
	V4SCP7_9ROSI	WD_REPEATS_REGION domain-containing protein. (546 aa)
	V4SDV7_9ROSI	MUTSd domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (853 aa)
	V4SQJ5_9ROSI	Uncharacterized protein. (318 aa)
	V4SPT0_9ROSI	Uncharacterized protein. (301 aa)
	V4SP53_9ROSI	FPG_CAT domain-containing protein. (408 aa)
	V4SJ82_9ROSI	ENDO3c domain-containing protein. (284 aa)
	V4SFR5_9ROSI	Uncharacterized protein. (430 aa)
	V4SIE9_9ROSI	ENDO3c domain-containing protein. (354 aa)
	V4TBP7_9ROSI	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1288 aa)
	V4TA77_9ROSI	Uncharacterized protein. (295 aa)
	V4T8C5_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (858 aa)
	V4T7B2_9ROSI	Uncharacterized protein. (612 aa)
	V4T506_9ROSI	Uncharacterized protein. (262 aa)
	V4T061_9ROSI	Uncharacterized protein. (304 aa)
	V4SZS9_9ROSI	Uncharacterized protein. (454 aa)
	V4SWG0_9ROSI	Uncharacterized protein. (629 aa)
	V4S5I3_9ROSI	Macro domain-containing protein. (762 aa)
	V4S5Y7_9ROSI	Uncharacterized protein. (124 aa)
	V4S689_9ROSI	Uncharacterized protein. (68 aa)
	V4S7R8_9ROSI	Uncharacterized protein. (635 aa)
	V4S8H7_9ROSI	Uncharacterized protein. (974 aa)
	V4S9R3_9ROSI	Uncharacterized protein. (332 aa)
	V4SUT9_9ROSI	Ubiquitin-like domain-containing protein. (76 aa)
	V4STG2_9ROSI	Uncharacterized protein. (401 aa)
	V4SSQ8_9ROSI	RECA_2 domain-containing protein. (622 aa)
	V4SB24_9ROSI	Uncharacterized protein. (658 aa)
	V4SB31_9ROSI	UmuC domain-containing protein. (677 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4S5I3_9ROSI	V4S9R3_9ROSI	V4S5I3	V4S9R3	Macro domain-containing protein.	Uncharacterized protein.	0.583
V4S5I3_9ROSI	V4SDV7_9ROSI	V4S5I3	V4SDV7	Macro domain-containing protein.	MUTSd domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.572
V4S5I3_9ROSI	V4SFR5_9ROSI	V4S5I3	V4SFR5	Macro domain-containing protein.	Uncharacterized protein.	0.566
V4S5I3_9ROSI	V4SGM4_9ROSI	V4S5I3	V4SGM4	Macro domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.531
V4S5I3_9ROSI	V4SIE9_9ROSI	V4S5I3	V4SIE9	Macro domain-containing protein.	ENDO3c domain-containing protein.	0.583
V4S5I3_9ROSI	V4SJ82_9ROSI	V4S5I3	V4SJ82	Macro domain-containing protein.	ENDO3c domain-containing protein.	0.551
V4S5I3_9ROSI	V4SP53_9ROSI	V4S5I3	V4SP53	Macro domain-containing protein.	FPG_CAT domain-containing protein.	0.541
V4S5I3_9ROSI	V4SZS9_9ROSI	V4S5I3	V4SZS9	Macro domain-containing protein.	Uncharacterized protein.	0.583
V4S5I3_9ROSI	V4T061_9ROSI	V4S5I3	V4T061	Macro domain-containing protein.	Uncharacterized protein.	0.566
V4S5I3_9ROSI	V4T506_9ROSI	V4S5I3	V4T506	Macro domain-containing protein.	Uncharacterized protein.	0.566
V4S5I3_9ROSI	V4T7B2_9ROSI	V4S5I3	V4T7B2	Macro domain-containing protein.	Uncharacterized protein.	0.493
V4S5I3_9ROSI	V4TA77_9ROSI	V4S5I3	V4TA77	Macro domain-containing protein.	Uncharacterized protein.	0.566
V4S5I3_9ROSI	V4TBP7_9ROSI	V4S5I3	V4TBP7	Macro domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.404
V4S5I3_9ROSI	V4TI78_9ROSI	V4S5I3	V4TI78	Macro domain-containing protein.	Lactamase_B domain-containing protein.	0.493
V4S5I3_9ROSI	V4TJR6_9ROSI	V4S5I3	V4TJR6	Macro domain-containing protein.	DRMBL domain-containing protein.	0.493
V4S5I3_9ROSI	V4TNY2_9ROSI	V4S5I3	V4TNY2	Macro domain-containing protein.	ERCC4 domain-containing protein.	0.558
V4S5I3_9ROSI	V4TY21_9ROSI	V4S5I3	V4TY21	Macro domain-containing protein.	Ku domain-containing protein.	0.757
V4S5I3_9ROSI	V4U982_9ROSI	V4S5I3	V4U982	Macro domain-containing protein.	DRMBL domain-containing protein.	0.493
V4S5I3_9ROSI	V4UAI5_9ROSI	V4S5I3	V4UAI5	Macro domain-containing protein.	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	0.554
V4S5I3_9ROSI	V4UEH5_9ROSI	V4S5I3	V4UEH5	Macro domain-containing protein.	Uncharacterized protein.	0.493