26 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4TA05_9ROSI	J domain-containing protein. (803 aa)
	V4T413_9ROSI	HDAC_interact domain-containing protein. (1419 aa)
	V4SYM5_9ROSI	Cir_N domain-containing protein. (511 aa)
	V4SRZ9_9ROSI	Uncharacterized protein. (620 aa)
	V4SL20_9ROSI	Uncharacterized protein. (601 aa)
	V4SAX6_9ROSI	Uncharacterized protein. (786 aa)
	V4S971_9ROSI	J domain-containing protein. (779 aa)
	V4S7H9_9ROSI	SANT domain-containing protein. (859 aa)
	V4RJH7_9ROSI	HDAC_interact domain-containing protein. (449 aa)
	V4RG17_9ROSI	Uncharacterized protein. (134 aa)
	V4WBN9_9ROSI	Uncharacterized protein. (920 aa)
	V4VFJ7_9ROSI	J domain-containing protein. (806 aa)
	V4UIT6_9ROSI	Uncharacterized protein. (564 aa)
	V4UDX9_9ROSI	Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1098 aa)
	V4UDS9_9ROSI	Uncharacterized protein. (403 aa)
	V4UBQ8_9ROSI	PCI domain-containing protein. (439 aa)
	V4U9S9_9ROSI	J domain-containing protein. (259 aa)
	V4U8Q6_9ROSI	Uncharacterized protein. (438 aa)
	V4U7Q0_9ROSI	2-Hacid_dh_C domain-containing protein. (632 aa)
	V4U6K6_9ROSI	SANT domain-containing protein. (450 aa)
	V4U0D8_9ROSI	SANT domain-containing protein. (865 aa)
	V4TXX9_9ROSI	Uncharacterized protein. (156 aa)
	V4TVF9_9ROSI	Uncharacterized protein. (89 aa)
	V4TTQ7_9ROSI	Uncharacterized protein. (784 aa)
	V4TPJ6_9ROSI	HDAC_interact domain-containing protein. (1448 aa)
	V4T5E9_9ROSI	SANT domain-containing protein. (938 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RJH7_9ROSI	V4TXX9_9ROSI	V4RJH7	V4TXX9	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.631
V4RJH7_9ROSI	V4UIT6_9ROSI	V4RJH7	V4UIT6	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.610
V4SYM5_9ROSI	V4U7Q0_9ROSI	V4SYM5	V4U7Q0	Cir_N domain-containing protein.	2-Hacid_dh_C domain-containing protein.	0.553
V4T413_9ROSI	V4TXX9_9ROSI	V4T413	V4TXX9	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.631
V4T413_9ROSI	V4UIT6_9ROSI	V4T413	V4UIT6	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.610
V4TPJ6_9ROSI	V4TXX9_9ROSI	V4TPJ6	V4TXX9	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.631
V4TPJ6_9ROSI	V4UIT6_9ROSI	V4TPJ6	V4UIT6	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.610
V4TXX9_9ROSI	V4RJH7_9ROSI	V4TXX9	V4RJH7	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.631
V4TXX9_9ROSI	V4T413_9ROSI	V4TXX9	V4T413	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.631
V4TXX9_9ROSI	V4TPJ6_9ROSI	V4TXX9	V4TPJ6	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.631
V4U7Q0_9ROSI	V4SYM5_9ROSI	V4U7Q0	V4SYM5	2-Hacid_dh_C domain-containing protein.	Cir_N domain-containing protein.	0.553
V4UIT6_9ROSI	V4RJH7_9ROSI	V4UIT6	V4RJH7	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.610
V4UIT6_9ROSI	V4T413_9ROSI	V4UIT6	V4T413	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.610
V4UIT6_9ROSI	V4TPJ6_9ROSI	V4UIT6	V4TPJ6	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.610