39 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4S721_9ROSI	Uncharacterized protein. (337 aa)
	V4T2Y0_9ROSI	Uncharacterized protein. (417 aa)
	V4T061_9ROSI	Uncharacterized protein. (304 aa)
	V4SYK4_9ROSI	Uncharacterized protein. (345 aa)
	V4SUC9_9ROSI	Uncharacterized protein. (594 aa)
	V4SIL8_9ROSI	VOC domain-containing protein. (168 aa)
	V4SGM4_9ROSI	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1041 aa)
	V4SGG3_9ROSI	Uncharacterized protein. (562 aa)
	V4SFR5_9ROSI	Uncharacterized protein. (430 aa)
	V4SDZ3_9ROSI	VOC domain-containing protein. (191 aa)
	V4SCN3_9ROSI	Uncharacterized protein. (448 aa)
	V4S9J7_9ROSI	Uncharacterized protein. (336 aa)
	V4T3K9_9ROSI	Uncharacterized protein. (492 aa)
	V4S6R8_9ROSI	WD_REPEATS_REGION domain-containing protein. (793 aa)
	V4S493_9ROSI	WD_REPEATS_REGION domain-containing protein. (366 aa)
	V4RWU2_9ROSI	VQ domain-containing protein. (194 aa)
	V4RS02_9ROSI	Sod_Cu domain-containing protein. (152 aa)
	V4RKR5_9ROSI	Uncharacterized protein. (253 aa)
	V4W6U5_9ROSI	UmuC domain-containing protein. (732 aa)
	V4VUY4_9ROSI	Uncharacterized protein. (454 aa)
	V4V3P2_9ROSI	Uncharacterized protein. (199 aa)
	V4V257_9ROSI	Uncharacterized protein. (276 aa)
	V4UF26_9ROSI	Uncharacterized protein. (680 aa)
	V4UDV5_9ROSI	VOC domain-containing protein. (194 aa)
	V4U994_9ROSI	Uncharacterized protein. (609 aa)
	V4U6B9_9ROSI	Uncharacterized protein. (421 aa)
	V4U1G1_9ROSI	ABC1 domain-containing protein. (614 aa)
	V4U141_9ROSI	Uncharacterized protein. (474 aa)
	V4TY88_9ROSI	Sod_Cu domain-containing protein. (180 aa)
	V4TVU8_9ROSI	Uncharacterized protein. (254 aa)
	V4TUL9_9ROSI	VOC domain-containing protein. (164 aa)
	V4TRG2_9ROSI	HORMA domain-containing protein. (204 aa)
	V4TRA0_9ROSI	WD_REPEATS_REGION domain-containing protein. (559 aa)
	V4TL07_9ROSI	AB hydrolase-1 domain-containing protein. (435 aa)
	V4TCP5_9ROSI	Uncharacterized protein. (836 aa)
	V4TBM6_9ROSI	Uncharacterized protein. (474 aa)
	V4TA77_9ROSI	Uncharacterized protein. (295 aa)
	V4T5U0_9ROSI	VOC domain-containing protein. (190 aa)
	V4T506_9ROSI	Uncharacterized protein. (262 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RS02_9ROSI	V4TY88_9ROSI	V4RS02	V4TY88	Sod_Cu domain-containing protein.	Sod_Cu domain-containing protein.	0.901
V4S493_9ROSI	V4SCN3_9ROSI	V4S493	V4SCN3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.936
V4S493_9ROSI	V4TRA0_9ROSI	V4S493	V4TRA0	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.911
V4S493_9ROSI	V4UF26_9ROSI	V4S493	V4UF26	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.910
V4SCN3_9ROSI	V4S493_9ROSI	V4SCN3	V4S493	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.936
V4SCN3_9ROSI	V4TRA0_9ROSI	V4SCN3	V4TRA0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.941
V4SCN3_9ROSI	V4UF26_9ROSI	V4SCN3	V4UF26	Uncharacterized protein.	Uncharacterized protein.	0.941
V4SGM4_9ROSI	V4TRG2_9ROSI	V4SGM4	V4TRG2	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	HORMA domain-containing protein.	0.993
V4SGM4_9ROSI	V4W6U5_9ROSI	V4SGM4	V4W6U5	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	UmuC domain-containing protein.	0.992
V4TRA0_9ROSI	V4S493_9ROSI	V4TRA0	V4S493	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.911
V4TRA0_9ROSI	V4SCN3_9ROSI	V4TRA0	V4SCN3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.941
V4TRA0_9ROSI	V4UF26_9ROSI	V4TRA0	V4UF26	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.901
V4TRG2_9ROSI	V4SGM4_9ROSI	V4TRG2	V4SGM4	HORMA domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.993
V4TRG2_9ROSI	V4W6U5_9ROSI	V4TRG2	V4W6U5	HORMA domain-containing protein.	UmuC domain-containing protein.	0.957
V4TY88_9ROSI	V4RS02_9ROSI	V4TY88	V4RS02	Sod_Cu domain-containing protein.	Sod_Cu domain-containing protein.	0.901
V4UF26_9ROSI	V4S493_9ROSI	V4UF26	V4S493	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.910
V4UF26_9ROSI	V4SCN3_9ROSI	V4UF26	V4SCN3	Uncharacterized protein.	Uncharacterized protein.	0.941
V4UF26_9ROSI	V4TRA0_9ROSI	V4UF26	V4TRA0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.901
V4W6U5_9ROSI	V4SGM4_9ROSI	V4W6U5	V4SGM4	UmuC domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.992
V4W6U5_9ROSI	V4TRG2_9ROSI	V4W6U5	V4TRG2	UmuC domain-containing protein.	HORMA domain-containing protein.	0.957