15 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4TY29_9ROSI	Uncharacterized protein. (440 aa)
	V4UU86_9ROSI	eIF-3c_N domain-containing protein. (271 aa)
	V4S6W7_9ROSI	PCI domain-containing protein; Belongs to the eIF-3 subunit C family. (308 aa)
	V4SH89_9ROSI	Uncharacterized protein. (176 aa)
	V4SI09_9ROSI	W2 domain-containing protein. (444 aa)
	V4SQR4_9ROSI	RPOL4c domain-containing protein. (138 aa)
	V4T029_9ROSI	eIF2B_5 domain-containing protein. (86 aa)
	V4T152_9ROSI	eIF-3c_N domain-containing protein. (283 aa)
	V4T507_9ROSI	W2 domain-containing protein. (732 aa)
	V4TDR5_9ROSI	Uncharacterized protein. (651 aa)
	V4TN72_9ROSI	eIF2B_5 domain-containing protein. (270 aa)
	V4UW32_9ROSI	W2 domain-containing protein. (436 aa)
	V4V9P6_9ROSI	Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (327 aa)
	V4WAU7_9ROSI	Eukaryotic translation initiation factor 3 subunit B. (120 aa)
	V4TSD8_9ROSI	eIF2A domain-containing protein. (592 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4S6W7_9ROSI	V4SI09_9ROSI	V4S6W7	V4SI09	PCI domain-containing protein; Belongs to the eIF-3 subunit C family.	W2 domain-containing protein.	0.957
V4S6W7_9ROSI	V4T029_9ROSI	V4S6W7	V4T029	PCI domain-containing protein; Belongs to the eIF-3 subunit C family.	eIF2B_5 domain-containing protein.	0.954
V4S6W7_9ROSI	V4T152_9ROSI	V4S6W7	V4T152	PCI domain-containing protein; Belongs to the eIF-3 subunit C family.	eIF-3c_N domain-containing protein.	0.858
V4S6W7_9ROSI	V4TN72_9ROSI	V4S6W7	V4TN72	PCI domain-containing protein; Belongs to the eIF-3 subunit C family.	eIF2B_5 domain-containing protein.	0.954
V4S6W7_9ROSI	V4TSD8_9ROSI	V4S6W7	V4TSD8	PCI domain-containing protein; Belongs to the eIF-3 subunit C family.	eIF2A domain-containing protein.	0.985
V4S6W7_9ROSI	V4UU86_9ROSI	V4S6W7	V4UU86	PCI domain-containing protein; Belongs to the eIF-3 subunit C family.	eIF-3c_N domain-containing protein.	0.966
V4S6W7_9ROSI	V4UW32_9ROSI	V4S6W7	V4UW32	PCI domain-containing protein; Belongs to the eIF-3 subunit C family.	W2 domain-containing protein.	0.957
V4S6W7_9ROSI	V4V9P6_9ROSI	V4S6W7	V4V9P6	PCI domain-containing protein; Belongs to the eIF-3 subunit C family.	Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.985
V4S6W7_9ROSI	V4WAU7_9ROSI	V4S6W7	V4WAU7	PCI domain-containing protein; Belongs to the eIF-3 subunit C family.	Eukaryotic translation initiation factor 3 subunit B.	0.985
V4SH89_9ROSI	V4SQR4_9ROSI	V4SH89	V4SQR4	Uncharacterized protein.	RPOL4c domain-containing protein.	0.953
V4SH89_9ROSI	V4TY29_9ROSI	V4SH89	V4TY29	Uncharacterized protein.	Uncharacterized protein.	0.401
V4SI09_9ROSI	V4S6W7_9ROSI	V4SI09	V4S6W7	W2 domain-containing protein.	PCI domain-containing protein; Belongs to the eIF-3 subunit C family.	0.957
V4SI09_9ROSI	V4T029_9ROSI	V4SI09	V4T029	W2 domain-containing protein.	eIF2B_5 domain-containing protein.	0.969
V4SI09_9ROSI	V4T152_9ROSI	V4SI09	V4T152	W2 domain-containing protein.	eIF-3c_N domain-containing protein.	0.957
V4SI09_9ROSI	V4T507_9ROSI	V4SI09	V4T507	W2 domain-containing protein.	W2 domain-containing protein.	0.687
V4SI09_9ROSI	V4TN72_9ROSI	V4SI09	V4TN72	W2 domain-containing protein.	eIF2B_5 domain-containing protein.	0.969
V4SI09_9ROSI	V4TSD8_9ROSI	V4SI09	V4TSD8	W2 domain-containing protein.	eIF2A domain-containing protein.	0.988
V4SI09_9ROSI	V4UU86_9ROSI	V4SI09	V4UU86	W2 domain-containing protein.	eIF-3c_N domain-containing protein.	0.957
V4SI09_9ROSI	V4UW32_9ROSI	V4SI09	V4UW32	W2 domain-containing protein.	W2 domain-containing protein.	0.901
V4SI09_9ROSI	V4V9P6_9ROSI	V4SI09	V4V9P6	W2 domain-containing protein.	Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.955