11 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4T2V7_9ROSI	AAA domain-containing protein. (364 aa)
	V4TEJ0_9ROSI	Uncharacterized protein. (742 aa)
	V4VU62_9ROSI	AAA domain-containing protein. (354 aa)
	V4RVR7_9ROSI	Uncharacterized protein. (767 aa)
	V4SEQ3_9ROSI	Replication factor C subunit 1. (958 aa)
	V4TIQ4_9ROSI	DNA_pol3_gamma3 domain-containing protein. (862 aa)
	V4TQJ3_9ROSI	DNA_pol3_gamma3 domain-containing protein. (1199 aa)
	V4UYZ0_9ROSI	AAA domain-containing protein. (1268 aa)
	V4T2P9_9ROSI	AAA domain-containing protein. (1204 aa)
	V4VLY3_9ROSI	AAA domain-containing protein. (331 aa)
	V4TCV9_9ROSI	AAA domain-containing protein. (382 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RVR7_9ROSI	V4SEQ3_9ROSI	V4RVR7	V4SEQ3	Uncharacterized protein.	Replication factor C subunit 1.	0.956
V4RVR7_9ROSI	V4T2P9_9ROSI	V4RVR7	V4T2P9	Uncharacterized protein.	AAA domain-containing protein.	0.956
V4RVR7_9ROSI	V4T2V7_9ROSI	V4RVR7	V4T2V7	Uncharacterized protein.	AAA domain-containing protein.	0.980
V4RVR7_9ROSI	V4TCV9_9ROSI	V4RVR7	V4TCV9	Uncharacterized protein.	AAA domain-containing protein.	0.933
V4RVR7_9ROSI	V4TIQ4_9ROSI	V4RVR7	V4TIQ4	Uncharacterized protein.	DNA_pol3_gamma3 domain-containing protein.	0.933
V4RVR7_9ROSI	V4TQJ3_9ROSI	V4RVR7	V4TQJ3	Uncharacterized protein.	DNA_pol3_gamma3 domain-containing protein.	0.933
V4RVR7_9ROSI	V4UYZ0_9ROSI	V4RVR7	V4UYZ0	Uncharacterized protein.	AAA domain-containing protein.	0.933
V4RVR7_9ROSI	V4VLY3_9ROSI	V4RVR7	V4VLY3	Uncharacterized protein.	AAA domain-containing protein.	0.980
V4SEQ3_9ROSI	V4RVR7_9ROSI	V4SEQ3	V4RVR7	Replication factor C subunit 1.	Uncharacterized protein.	0.956
V4SEQ3_9ROSI	V4T2V7_9ROSI	V4SEQ3	V4T2V7	Replication factor C subunit 1.	AAA domain-containing protein.	0.984
V4SEQ3_9ROSI	V4TCV9_9ROSI	V4SEQ3	V4TCV9	Replication factor C subunit 1.	AAA domain-containing protein.	0.909
V4SEQ3_9ROSI	V4TEJ0_9ROSI	V4SEQ3	V4TEJ0	Replication factor C subunit 1.	Uncharacterized protein.	0.956
V4SEQ3_9ROSI	V4TIQ4_9ROSI	V4SEQ3	V4TIQ4	Replication factor C subunit 1.	DNA_pol3_gamma3 domain-containing protein.	0.909
V4SEQ3_9ROSI	V4TQJ3_9ROSI	V4SEQ3	V4TQJ3	Replication factor C subunit 1.	DNA_pol3_gamma3 domain-containing protein.	0.909
V4SEQ3_9ROSI	V4UYZ0_9ROSI	V4SEQ3	V4UYZ0	Replication factor C subunit 1.	AAA domain-containing protein.	0.909
V4SEQ3_9ROSI	V4VLY3_9ROSI	V4SEQ3	V4VLY3	Replication factor C subunit 1.	AAA domain-containing protein.	0.985
V4SEQ3_9ROSI	V4VU62_9ROSI	V4SEQ3	V4VU62	Replication factor C subunit 1.	AAA domain-containing protein.	0.964
V4T2P9_9ROSI	V4RVR7_9ROSI	V4T2P9	V4RVR7	AAA domain-containing protein.	Uncharacterized protein.	0.956
V4T2P9_9ROSI	V4T2V7_9ROSI	V4T2P9	V4T2V7	AAA domain-containing protein.	AAA domain-containing protein.	0.984
V4T2P9_9ROSI	V4TCV9_9ROSI	V4T2P9	V4TCV9	AAA domain-containing protein.	AAA domain-containing protein.	0.909