59 items (Citrus clementina) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	V4TR87_9ROSI	AAA domain-containing protein; Belongs to the AAA ATPase family. (597 aa)
	V4TR99_9ROSI	NAC domain-containing protein. (632 aa)
	V4TRG2_9ROSI	HORMA domain-containing protein. (204 aa)
	V4TSM1_9ROSI	Uncharacterized protein. (1263 aa)
	V4TV27_9ROSI	ANK_REP_REGION domain-containing protein. (482 aa)
	V4TV50_9ROSI	Lipase_GDSL domain-containing protein. (219 aa)
	V4TW55_9ROSI	Rep-A_N domain-containing protein. (119 aa)
	V4TZ66_9ROSI	NAC domain-containing protein. (306 aa)
	V4U9N1_9ROSI	Uncharacterized protein. (570 aa)
	V4UC22_9ROSI	Uncharacterized protein. (1239 aa)
	V4UDK9_9ROSI	NAC domain-containing protein. (391 aa)
	V4UYZ0_9ROSI	AAA domain-containing protein. (1268 aa)
	V4V3U9_9ROSI	DNA polymerase. (1741 aa)
	V4VFC4_9ROSI	ATPase_AAA_core domain-containing protein. (77 aa)
	V4VGA7_9ROSI	Ubiquitin-like domain-containing protein. (156 aa)
	V4VK56_9ROSI	Uncharacterized protein. (813 aa)
	V4VLY3_9ROSI	AAA domain-containing protein. (331 aa)
	V4VNL9_9ROSI	NAC domain-containing protein. (605 aa)
	V4WE54_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (653 aa)
	V4WBS0_9ROSI	Uncharacterized protein. (318 aa)
	V4W6U5_9ROSI	UmuC domain-containing protein. (732 aa)
	V4VU62_9ROSI	AAA domain-containing protein. (354 aa)
	V4VS11_9ROSI	Uncharacterized protein. (1241 aa)
	V4TIQ4_9ROSI	DNA_pol3_gamma3 domain-containing protein. (862 aa)
	V4RRA1_9ROSI	PCNA_C domain-containing protein. (113 aa)
	V4RT13_9ROSI	Ubiquitin-like domain-containing protein. (156 aa)
	V4RVR7_9ROSI	Uncharacterized protein. (767 aa)
	V4S2C1_9ROSI	Uncharacterized protein. (267 aa)
	V4SB24_9ROSI	Uncharacterized protein. (658 aa)
	V4SB31_9ROSI	UmuC domain-containing protein. (677 aa)
	V4SCI8_9ROSI	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	V4SD54_9ROSI	Uncharacterized protein. (321 aa)
	V4SD56_9ROSI	Uncharacterized protein. (175 aa)
	V4SDL5_9ROSI	Ribosomal_S27 domain-containing protein. (80 aa)
	V4SEQ3_9ROSI	Replication factor C subunit 1. (958 aa)
	V4SF43_9ROSI	CBFD_NFYB_HMF domain-containing protein. (143 aa)
	V4SFA7_9ROSI	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2206 aa)
	V4SFW3_9ROSI	Uncharacterized protein. (297 aa)
	V4SGM4_9ROSI	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1041 aa)
	V4SGY4_9ROSI	Uncharacterized protein. (343 aa)
	V4SL33_9ROSI	Uncharacterized protein. (807 aa)
	V4SRW7_9ROSI	Uncharacterized protein. (864 aa)
	V4SUD3_9ROSI	Uncharacterized protein. (799 aa)
	V4SXU9_9ROSI	Uncharacterized protein. (238 aa)
	V4T1Y7_9ROSI	Uncharacterized protein. (783 aa)
	V4T2P9_9ROSI	AAA domain-containing protein. (1204 aa)
	V4T2V7_9ROSI	AAA domain-containing protein. (364 aa)
	V4T327_9ROSI	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
	V4T8C5_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (858 aa)
	V4TBM0_9ROSI	Uncharacterized protein. (122 aa)
	V4TBY1_9ROSI	Ubiquitin-like domain-containing protein. (96 aa)
	V4TCV9_9ROSI	AAA domain-containing protein. (382 aa)
	V4TD24_9ROSI	AAA domain-containing protein; Belongs to the AAA ATPase family. (476 aa)
	V4TDH5_9ROSI	F-box domain-containing protein. (175 aa)
	V4TEJ0_9ROSI	Uncharacterized protein. (742 aa)
	V4TKK4_9ROSI	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (555 aa)
	V4TQJ3_9ROSI	DNA_pol3_gamma3 domain-containing protein. (1199 aa)
	V4TQJ6_9ROSI	Uncharacterized protein. (173 aa)
	V4TQK0_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (623 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RRA1_9ROSI	V4RT13_9ROSI	V4RRA1	V4RT13	PCNA_C domain-containing protein.	Ubiquitin-like domain-containing protein.	0.847
V4RRA1_9ROSI	V4RVR7_9ROSI	V4RRA1	V4RVR7	PCNA_C domain-containing protein.	Uncharacterized protein.	0.966
V4RRA1_9ROSI	V4SB24_9ROSI	V4RRA1	V4SB24	PCNA_C domain-containing protein.	Uncharacterized protein.	0.945
V4RRA1_9ROSI	V4SB31_9ROSI	V4RRA1	V4SB31	PCNA_C domain-containing protein.	UmuC domain-containing protein.	0.945
V4RRA1_9ROSI	V4SD54_9ROSI	V4RRA1	V4SD54	PCNA_C domain-containing protein.	Uncharacterized protein.	0.578
V4RRA1_9ROSI	V4SD56_9ROSI	V4RRA1	V4SD56	PCNA_C domain-containing protein.	Uncharacterized protein.	0.723
V4RRA1_9ROSI	V4SDL5_9ROSI	V4RRA1	V4SDL5	PCNA_C domain-containing protein.	Ribosomal_S27 domain-containing protein.	0.847
V4RRA1_9ROSI	V4SEQ3_9ROSI	V4RRA1	V4SEQ3	PCNA_C domain-containing protein.	Replication factor C subunit 1.	0.963
V4RRA1_9ROSI	V4SF43_9ROSI	V4RRA1	V4SF43	PCNA_C domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.760
V4RRA1_9ROSI	V4SFA7_9ROSI	V4RRA1	V4SFA7	PCNA_C domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.979
V4RRA1_9ROSI	V4SGM4_9ROSI	V4RRA1	V4SGM4	PCNA_C domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.978
V4RRA1_9ROSI	V4SGY4_9ROSI	V4RRA1	V4SGY4	PCNA_C domain-containing protein.	Uncharacterized protein.	0.578
V4RRA1_9ROSI	V4SL33_9ROSI	V4RRA1	V4SL33	PCNA_C domain-containing protein.	Uncharacterized protein.	0.487
V4RRA1_9ROSI	V4SRW7_9ROSI	V4RRA1	V4SRW7	PCNA_C domain-containing protein.	Uncharacterized protein.	0.487
V4RRA1_9ROSI	V4SUD3_9ROSI	V4RRA1	V4SUD3	PCNA_C domain-containing protein.	Uncharacterized protein.	0.487
V4RRA1_9ROSI	V4SXU9_9ROSI	V4RRA1	V4SXU9	PCNA_C domain-containing protein.	Uncharacterized protein.	0.578
V4RRA1_9ROSI	V4T1Y7_9ROSI	V4RRA1	V4T1Y7	PCNA_C domain-containing protein.	Uncharacterized protein.	0.487
V4RRA1_9ROSI	V4T2P9_9ROSI	V4RRA1	V4T2P9	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.963
V4RRA1_9ROSI	V4T2V7_9ROSI	V4RRA1	V4T2V7	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.983
V4RRA1_9ROSI	V4T327_9ROSI	V4RRA1	V4T327	PCNA_C domain-containing protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.800