36 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	V4UDK9_9ROSI	NAC domain-containing protein. (391 aa)
	V4TZ66_9ROSI	NAC domain-containing protein. (306 aa)
	V4TW55_9ROSI	Rep-A_N domain-containing protein. (119 aa)
	V4TV50_9ROSI	Lipase_GDSL domain-containing protein. (219 aa)
	V4TR99_9ROSI	NAC domain-containing protein. (632 aa)
	V4TQY2_9ROSI	CULLIN_2 domain-containing protein; Belongs to the cullin family. (805 aa)
	V4TQK0_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (623 aa)
	V4TQJ3_9ROSI	DNA_pol3_gamma3 domain-containing protein. (1199 aa)
	V4TNY8_9ROSI	CPSF_A domain-containing protein. (1088 aa)
	V4U1Q6_9ROSI	WD_REPEATS_REGION domain-containing protein. (512 aa)
	V4T8C5_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (858 aa)
	V4T2V7_9ROSI	AAA domain-containing protein. (364 aa)
	V4TIQ4_9ROSI	DNA_pol3_gamma3 domain-containing protein. (862 aa)
	V4TEJ0_9ROSI	Uncharacterized protein. (742 aa)
	V4TDH5_9ROSI	F-box domain-containing protein. (175 aa)
	V4TCV9_9ROSI	AAA domain-containing protein. (382 aa)
	V4TBY1_9ROSI	Ubiquitin-like domain-containing protein. (96 aa)
	V4TBM0_9ROSI	Uncharacterized protein. (122 aa)
	V4T2P9_9ROSI	AAA domain-containing protein. (1204 aa)
	V4SFA7_9ROSI	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2206 aa)
	V4SFA4_9ROSI	WD_REPEATS_REGION domain-containing protein. (763 aa)
	V4SF43_9ROSI	CBFD_NFYB_HMF domain-containing protein. (143 aa)
	V4SEQ3_9ROSI	Replication factor C subunit 1. (958 aa)
	V4SDL5_9ROSI	Ribosomal_S27 domain-containing protein. (80 aa)
	V4SD56_9ROSI	Uncharacterized protein. (175 aa)
	V4SCI8_9ROSI	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	V4S4Q9_9ROSI	Uncharacterized protein. (995 aa)
	V4RVR7_9ROSI	Uncharacterized protein. (767 aa)
	V4RT13_9ROSI	Ubiquitin-like domain-containing protein. (156 aa)
	V4RRA1_9ROSI	PCNA_C domain-containing protein. (113 aa)
	V4WE54_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (653 aa)
	V4VU62_9ROSI	AAA domain-containing protein. (354 aa)
	V4VNL9_9ROSI	NAC domain-containing protein. (605 aa)
	V4VLY3_9ROSI	AAA domain-containing protein. (331 aa)
	V4VGA7_9ROSI	Ubiquitin-like domain-containing protein. (156 aa)
	V4UYZ0_9ROSI	AAA domain-containing protein. (1268 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RRA1_9ROSI	V4RT13_9ROSI	V4RRA1	V4RT13	PCNA_C domain-containing protein.	Ubiquitin-like domain-containing protein.	0.847
V4RRA1_9ROSI	V4RVR7_9ROSI	V4RRA1	V4RVR7	PCNA_C domain-containing protein.	Uncharacterized protein.	0.966
V4RRA1_9ROSI	V4S4Q9_9ROSI	V4RRA1	V4S4Q9	PCNA_C domain-containing protein.	Uncharacterized protein.	0.619
V4RRA1_9ROSI	V4SD56_9ROSI	V4RRA1	V4SD56	PCNA_C domain-containing protein.	Uncharacterized protein.	0.723
V4RRA1_9ROSI	V4SDL5_9ROSI	V4RRA1	V4SDL5	PCNA_C domain-containing protein.	Ribosomal_S27 domain-containing protein.	0.847
V4RRA1_9ROSI	V4SEQ3_9ROSI	V4RRA1	V4SEQ3	PCNA_C domain-containing protein.	Replication factor C subunit 1.	0.963
V4RRA1_9ROSI	V4SF43_9ROSI	V4RRA1	V4SF43	PCNA_C domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.760
V4RRA1_9ROSI	V4SFA4_9ROSI	V4RRA1	V4SFA4	PCNA_C domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.619
V4RRA1_9ROSI	V4SFA7_9ROSI	V4RRA1	V4SFA7	PCNA_C domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.979
V4RRA1_9ROSI	V4T2P9_9ROSI	V4RRA1	V4T2P9	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.963
V4RRA1_9ROSI	V4T2V7_9ROSI	V4RRA1	V4T2V7	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.983
V4RRA1_9ROSI	V4T8C5_9ROSI	V4RRA1	V4T8C5	PCNA_C domain-containing protein.	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.	0.723
V4RRA1_9ROSI	V4TBM0_9ROSI	V4RRA1	V4TBM0	PCNA_C domain-containing protein.	Uncharacterized protein.	0.436
V4RRA1_9ROSI	V4TBY1_9ROSI	V4RRA1	V4TBY1	PCNA_C domain-containing protein.	Ubiquitin-like domain-containing protein.	0.847
V4RRA1_9ROSI	V4TCV9_9ROSI	V4RRA1	V4TCV9	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.959
V4RRA1_9ROSI	V4TDH5_9ROSI	V4RRA1	V4TDH5	PCNA_C domain-containing protein.	F-box domain-containing protein.	0.723
V4RRA1_9ROSI	V4TEJ0_9ROSI	V4RRA1	V4TEJ0	PCNA_C domain-containing protein.	Uncharacterized protein.	0.966
V4RRA1_9ROSI	V4TIQ4_9ROSI	V4RRA1	V4TIQ4	PCNA_C domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.959
V4RRA1_9ROSI	V4TNY8_9ROSI	V4RRA1	V4TNY8	PCNA_C domain-containing protein.	CPSF_A domain-containing protein.	0.690
V4RRA1_9ROSI	V4TQJ3_9ROSI	V4RRA1	V4TQJ3	PCNA_C domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.959