11 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4TBU3_9ROSI	S1 motif domain-containing protein. (344 aa)
	V4RYA8_9ROSI	Tr-type G domain-containing protein. (466 aa)
	V4T029_9ROSI	eIF2B_5 domain-containing protein. (86 aa)
	V4T1B6_9ROSI	Uncharacterized protein. (317 aa)
	V4TL29_9ROSI	Uncharacterized protein. (307 aa)
	V4TN72_9ROSI	eIF2B_5 domain-containing protein. (270 aa)
	V4TNW1_9ROSI	Uncharacterized protein. (238 aa)
	V4U5J8_9ROSI	Uncharacterized protein. (347 aa)
	V4U625_9ROSI	Uncharacterized protein. (388 aa)
	V4WBX6_9ROSI	Uncharacterized protein. (476 aa)
	V4RXZ9_9ROSI	Uncharacterized protein. (336 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RXZ9_9ROSI	V4TL29_9ROSI	V4RXZ9	V4TL29	Uncharacterized protein.	Uncharacterized protein.	0.450
V4RXZ9_9ROSI	V4TNW1_9ROSI	V4RXZ9	V4TNW1	Uncharacterized protein.	Uncharacterized protein.	0.423
V4RXZ9_9ROSI	V4U5J8_9ROSI	V4RXZ9	V4U5J8	Uncharacterized protein.	Uncharacterized protein.	0.467
V4RXZ9_9ROSI	V4U625_9ROSI	V4RXZ9	V4U625	Uncharacterized protein.	Uncharacterized protein.	0.461
V4RYA8_9ROSI	V4T029_9ROSI	V4RYA8	V4T029	Tr-type G domain-containing protein.	eIF2B_5 domain-containing protein.	0.997
V4RYA8_9ROSI	V4TBU3_9ROSI	V4RYA8	V4TBU3	Tr-type G domain-containing protein.	S1 motif domain-containing protein.	0.999
V4RYA8_9ROSI	V4TN72_9ROSI	V4RYA8	V4TN72	Tr-type G domain-containing protein.	eIF2B_5 domain-containing protein.	0.997
V4T029_9ROSI	V4RYA8_9ROSI	V4T029	V4RYA8	eIF2B_5 domain-containing protein.	Tr-type G domain-containing protein.	0.997
V4T029_9ROSI	V4TBU3_9ROSI	V4T029	V4TBU3	eIF2B_5 domain-containing protein.	S1 motif domain-containing protein.	0.999
V4T029_9ROSI	V4TN72_9ROSI	V4T029	V4TN72	eIF2B_5 domain-containing protein.	eIF2B_5 domain-containing protein.	0.902
V4T029_9ROSI	V4WBX6_9ROSI	V4T029	V4WBX6	eIF2B_5 domain-containing protein.	Uncharacterized protein.	0.979
V4TBU3_9ROSI	V4RYA8_9ROSI	V4TBU3	V4RYA8	S1 motif domain-containing protein.	Tr-type G domain-containing protein.	0.999
V4TBU3_9ROSI	V4T029_9ROSI	V4TBU3	V4T029	S1 motif domain-containing protein.	eIF2B_5 domain-containing protein.	0.999
V4TBU3_9ROSI	V4TN72_9ROSI	V4TBU3	V4TN72	S1 motif domain-containing protein.	eIF2B_5 domain-containing protein.	0.999
V4TBU3_9ROSI	V4WBX6_9ROSI	V4TBU3	V4WBX6	S1 motif domain-containing protein.	Uncharacterized protein.	0.991
V4TL29_9ROSI	V4RXZ9_9ROSI	V4TL29	V4RXZ9	Uncharacterized protein.	Uncharacterized protein.	0.450
V4TL29_9ROSI	V4TNW1_9ROSI	V4TL29	V4TNW1	Uncharacterized protein.	Uncharacterized protein.	0.411
V4TL29_9ROSI	V4U5J8_9ROSI	V4TL29	V4U5J8	Uncharacterized protein.	Uncharacterized protein.	0.404
V4TL29_9ROSI	V4U625_9ROSI	V4TL29	V4U625	Uncharacterized protein.	Uncharacterized protein.	0.408
V4TN72_9ROSI	V4RYA8_9ROSI	V4TN72	V4RYA8	eIF2B_5 domain-containing protein.	Tr-type G domain-containing protein.	0.997