108 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4U5T7_9ROSI	Uncharacterized protein. (1510 aa)
	V4VLC0_9ROSI	ABC transporter domain-containing protein. (654 aa)
	V4VPB3_9ROSI	ABC transporter domain-containing protein. (706 aa)
	V4VRU0_9ROSI	EPSP_synthase domain-containing protein. (383 aa)
	V4W607_9ROSI	ABC transporter domain-containing protein. (725 aa)
	V4W7W8_9ROSI	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (244 aa)
	V4WBX6_9ROSI	Uncharacterized protein. (476 aa)
	V4WCN3_9ROSI	Uncharacterized protein. (282 aa)
	V4WE88_9ROSI	Uncharacterized protein. (672 aa)
	V4WEN2_9ROSI	Uncharacterized protein. (562 aa)
	V4WEZ9_9ROSI	RING-type domain-containing protein. (260 aa)
	V4WGJ8_9ROSI	Uncharacterized protein. (1466 aa)
	V4RK98_9ROSI	Uncharacterized protein. (527 aa)
	V4RR83_9ROSI	ABC transporter domain-containing protein. (673 aa)
	V4RT13_9ROSI	Ubiquitin-like domain-containing protein. (156 aa)
	V4RT40_9ROSI	ABC transporter domain-containing protein. (1010 aa)
	V4RXT3_9ROSI	Uncharacterized protein. (1047 aa)
	V4RYA8_9ROSI	Tr-type G domain-containing protein. (466 aa)
	V4S015_9ROSI	Uncharacterized protein. (69 aa)
	V4S2M7_9ROSI	ABC transporter domain-containing protein. (122 aa)
	V4S2N1_9ROSI	Uncharacterized protein. (1893 aa)
	V4S3E9_9ROSI	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (281 aa)
	V4S3I3_9ROSI	Uncharacterized protein. (356 aa)
	V4S498_9ROSI	ABC transporter domain-containing protein. (674 aa)
	V4S4A3_9ROSI	ABC transporter domain-containing protein. (703 aa)
	V4S4P6_9ROSI	ABC transporter domain-containing protein. (656 aa)
	V4S646_9ROSI	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (249 aa)
	V4S6S5_9ROSI	Uncharacterized protein. (290 aa)
	V4S6Z9_9ROSI	ABC transporter domain-containing protein. (746 aa)
	V4S922_9ROSI	Uncharacterized protein. (1483 aa)
	V4S9C1_9ROSI	ABC transporter domain-containing protein. (439 aa)
	V4SDL5_9ROSI	Ribosomal_S27 domain-containing protein. (80 aa)
	V4SDY4_9ROSI	ABC transporter domain-containing protein. (673 aa)
	V4SEB7_9ROSI	Uncharacterized protein. (1452 aa)
	V4SFT8_9ROSI	ABC transporter domain-containing protein. (737 aa)
	V4SJ05_9ROSI	ABC2_membrane domain-containing protein. (232 aa)
	V4SL28_9ROSI	ABC transporter domain-containing protein. (723 aa)
	V4SL47_9ROSI	ABC transporter domain-containing protein. (678 aa)
	V4SLK8_9ROSI	Uncharacterized protein. (1467 aa)
	V4SR26_9ROSI	ABC transporter domain-containing protein. (647 aa)
	V4STB6_9ROSI	ABC transporter domain-containing protein. (741 aa)
	V4STN0_9ROSI	PHB domain-containing protein. (363 aa)
	V4STV8_9ROSI	ABC transporter domain-containing protein. (637 aa)
	V4SVW9_9ROSI	RING-type domain-containing protein. (422 aa)
	V4SWV6_9ROSI	Uncharacterized protein. (709 aa)
	V4SZ06_9ROSI	Uncharacterized protein. (290 aa)
	V4T029_9ROSI	eIF2B_5 domain-containing protein. (86 aa)
	V4T093_9ROSI	Uncharacterized protein. (240 aa)
	V4T2N5_9ROSI	PI31_Prot_N domain-containing protein. (337 aa)
	V4T3U3_9ROSI	ABC2_membrane domain-containing protein. (354 aa)
	V4T9Y3_9ROSI	ABC transporter domain-containing protein. (348 aa)
	V4TBU3_9ROSI	S1 motif domain-containing protein. (344 aa)
	V4TBY1_9ROSI	Ubiquitin-like domain-containing protein. (96 aa)
	V4TCJ1_9ROSI	ABC transporter domain-containing protein. (691 aa)
	V4TDI8_9ROSI	Uncharacterized protein. (1458 aa)
	V4TDP5_9ROSI	ABC transporter domain-containing protein. (1118 aa)
	V4TDU5_9ROSI	ABC transporter domain-containing protein. (355 aa)
	V4TF91_9ROSI	ABC transporter domain-containing protein. (325 aa)
	V4TG08_9ROSI	RING-type domain-containing protein. (423 aa)
	V4THP1_9ROSI	ABC2_membrane domain-containing protein. (397 aa)
	V4TI71_9ROSI	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (302 aa)
	V4TMH3_9ROSI	ABC transporter domain-containing protein. (966 aa)
	V4TN72_9ROSI	eIF2B_5 domain-containing protein. (270 aa)
	V4TNT7_9ROSI	F-box domain-containing protein. (342 aa)
	V4TP42_9ROSI	Retrotran_gag_3 domain-containing protein. (246 aa)
	V4TQR6_9ROSI	Uncharacterized protein. (455 aa)
	V4TS05_9ROSI	Uncharacterized protein. (1323 aa)
	V4TS21_9ROSI	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (236 aa)
	V4TWF1_9ROSI	Uncharacterized protein. (367 aa)
	V4TWZ2_9ROSI	ABC transporter domain-containing protein. (607 aa)
	V4TX64_9ROSI	ABC transporter domain-containing protein. (628 aa)
	V4TXN4_9ROSI	Uncharacterized protein. (316 aa)
	V4TYY2_9ROSI	Uncharacterized protein. (1255 aa)
	V4TZ94_9ROSI	ABC transporter domain-containing protein. (687 aa)
	V4U1X9_9ROSI	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (273 aa)
	V4U3W5_9ROSI	Uncharacterized protein. (1513 aa)
	V4U460_9ROSI	Uncharacterized protein. (1536 aa)
	V4U5N9_9ROSI	ABC transporter domain-containing protein. (697 aa)
	V4VJJ4_9ROSI	ABC transporter domain-containing protein. (949 aa)
	V4U7C4_9ROSI	Uncharacterized protein. (313 aa)
	V4UAX0_9ROSI	Uncharacterized protein. (1166 aa)
	V4UAY3_9ROSI	ABC transporter domain-containing protein. (661 aa)
	V4UCL5_9ROSI	ABC transporter domain-containing protein. (615 aa)
	V4UDG8_9ROSI	Uncharacterized protein. (1623 aa)
	V4UFF6_9ROSI	ABC transporter domain-containing protein. (608 aa)
	V4UFI4_9ROSI	ABC transporter domain-containing protein. (820 aa)
	V4UH77_9ROSI	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (249 aa)
	V4UI17_9ROSI	RING-type domain-containing protein. (255 aa)
	V4UI52_9ROSI	Uncharacterized protein. (1339 aa)
	V4UID5_9ROSI	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (295 aa)
	V4UIT0_9ROSI	Uncharacterized protein. (1625 aa)
	V4UJQ2_9ROSI	Uncharacterized protein. (1252 aa)
	V4UJS8_9ROSI	RING-type domain-containing protein. (240 aa)
	V4UJZ6_9ROSI	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (240 aa)
	V4UL28_9ROSI	ABC transporter domain-containing protein. (612 aa)
	V4ULS0_9ROSI	Uncharacterized protein. (723 aa)
	V4UN68_9ROSI	Uncharacterized protein. (953 aa)
	V4UNE8_9ROSI	Uncharacterized protein. (1490 aa)
	V4UQ02_9ROSI	PRKCSH domain-containing protein. (304 aa)
	V4URR0_9ROSI	ABC transporter domain-containing protein. (730 aa)
	V4UW12_9ROSI	ABC transporter domain-containing protein. (229 aa)
	V4V0W1_9ROSI	ABC transporter domain-containing protein. (643 aa)
	V4V6L5_9ROSI	ABC2_membrane domain-containing protein. (371 aa)
	V4V7U9_9ROSI	RING-type domain-containing protein. (229 aa)
	V4VAU8_9ROSI	ABC transporter domain-containing protein. (752 aa)
	V4VFZ0_9ROSI	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (274 aa)
	V4VGA7_9ROSI	Ubiquitin-like domain-containing protein. (156 aa)
	V4VIP1_9ROSI	Uncharacterized protein. (711 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RT13_9ROSI	V4RYA8_9ROSI	V4RT13	V4RYA8	Ubiquitin-like domain-containing protein.	Tr-type G domain-containing protein.	0.829
V4RT13_9ROSI	V4S3E9_9ROSI	V4RT13	V4S3E9	Ubiquitin-like domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.430
V4RT13_9ROSI	V4S646_9ROSI	V4RT13	V4S646	Ubiquitin-like domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.810
V4RT13_9ROSI	V4S6S5_9ROSI	V4RT13	V4S6S5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.403
V4RT13_9ROSI	V4SDL5_9ROSI	V4RT13	V4SDL5	Ubiquitin-like domain-containing protein.	Ribosomal_S27 domain-containing protein.	0.902
V4RT13_9ROSI	V4STN0_9ROSI	V4RT13	V4STN0	Ubiquitin-like domain-containing protein.	PHB domain-containing protein.	0.545
V4RT13_9ROSI	V4SVW9_9ROSI	V4RT13	V4SVW9	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.403
V4RT13_9ROSI	V4SZ06_9ROSI	V4RT13	V4SZ06	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.537
V4RT13_9ROSI	V4T029_9ROSI	V4RT13	V4T029	Ubiquitin-like domain-containing protein.	eIF2B_5 domain-containing protein.	0.852
V4RT13_9ROSI	V4T2N5_9ROSI	V4RT13	V4T2N5	Ubiquitin-like domain-containing protein.	PI31_Prot_N domain-containing protein.	0.537
V4RT13_9ROSI	V4TBU3_9ROSI	V4RT13	V4TBU3	Ubiquitin-like domain-containing protein.	S1 motif domain-containing protein.	0.925
V4RT13_9ROSI	V4TG08_9ROSI	V4RT13	V4TG08	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.403
V4RT13_9ROSI	V4TI71_9ROSI	V4RT13	V4TI71	Ubiquitin-like domain-containing protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.879
V4RT13_9ROSI	V4TN72_9ROSI	V4RT13	V4TN72	Ubiquitin-like domain-containing protein.	eIF2B_5 domain-containing protein.	0.852
V4RT13_9ROSI	V4TNT7_9ROSI	V4RT13	V4TNT7	Ubiquitin-like domain-containing protein.	F-box domain-containing protein.	0.439
V4RT13_9ROSI	V4TS21_9ROSI	V4RT13	V4TS21	Ubiquitin-like domain-containing protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.915
V4RT13_9ROSI	V4U1X9_9ROSI	V4RT13	V4U1X9	Ubiquitin-like domain-containing protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.826
V4RT13_9ROSI	V4UH77_9ROSI	V4RT13	V4UH77	Ubiquitin-like domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.810
V4RT13_9ROSI	V4UI17_9ROSI	V4RT13	V4UI17	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.403
V4RT13_9ROSI	V4UID5_9ROSI	V4RT13	V4UID5	Ubiquitin-like domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.430