29 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4UDK9_9ROSI	NAC domain-containing protein. (391 aa)
	V4TZ66_9ROSI	NAC domain-containing protein. (306 aa)
	V4TW55_9ROSI	Rep-A_N domain-containing protein. (119 aa)
	V4TV50_9ROSI	Lipase_GDSL domain-containing protein. (219 aa)
	V4TR99_9ROSI	NAC domain-containing protein. (632 aa)
	V4TQK0_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (623 aa)
	V4TQJ3_9ROSI	DNA_pol3_gamma3 domain-containing protein. (1199 aa)
	V4TIQ4_9ROSI	DNA_pol3_gamma3 domain-containing protein. (862 aa)
	V4TEJ0_9ROSI	Uncharacterized protein. (742 aa)
	V4TDH5_9ROSI	F-box domain-containing protein. (175 aa)
	V4TCV9_9ROSI	AAA domain-containing protein. (382 aa)
	V4TBY1_9ROSI	Ubiquitin-like domain-containing protein. (96 aa)
	V4TBM0_9ROSI	Uncharacterized protein. (122 aa)
	V4T8C5_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (858 aa)
	V4T2V7_9ROSI	AAA domain-containing protein. (364 aa)
	V4T2P9_9ROSI	AAA domain-containing protein. (1204 aa)
	V4SEQ3_9ROSI	Replication factor C subunit 1. (958 aa)
	V4SDL5_9ROSI	Ribosomal_S27 domain-containing protein. (80 aa)
	V4SD56_9ROSI	Uncharacterized protein. (175 aa)
	V4SB31_9ROSI	UmuC domain-containing protein. (677 aa)
	V4SB24_9ROSI	Uncharacterized protein. (658 aa)
	V4RVR7_9ROSI	Uncharacterized protein. (767 aa)
	V4RT13_9ROSI	Ubiquitin-like domain-containing protein. (156 aa)
	V4WE54_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (653 aa)
	V4VU62_9ROSI	AAA domain-containing protein. (354 aa)
	V4VNL9_9ROSI	NAC domain-containing protein. (605 aa)
	V4VLY3_9ROSI	AAA domain-containing protein. (331 aa)
	V4VGA7_9ROSI	Ubiquitin-like domain-containing protein. (156 aa)
	V4UYZ0_9ROSI	AAA domain-containing protein. (1268 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RT13_9ROSI	V4RVR7_9ROSI	V4RT13	V4RVR7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.447
V4RT13_9ROSI	V4SB24_9ROSI	V4RT13	V4SB24	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.576
V4RT13_9ROSI	V4SB31_9ROSI	V4RT13	V4SB31	Ubiquitin-like domain-containing protein.	UmuC domain-containing protein.	0.576
V4RT13_9ROSI	V4SDL5_9ROSI	V4RT13	V4SDL5	Ubiquitin-like domain-containing protein.	Ribosomal_S27 domain-containing protein.	0.902
V4RT13_9ROSI	V4SEQ3_9ROSI	V4RT13	V4SEQ3	Ubiquitin-like domain-containing protein.	Replication factor C subunit 1.	0.549
V4RT13_9ROSI	V4T2P9_9ROSI	V4RT13	V4T2P9	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.549
V4RT13_9ROSI	V4T2V7_9ROSI	V4RT13	V4T2V7	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.596
V4RT13_9ROSI	V4TCV9_9ROSI	V4RT13	V4TCV9	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.434
V4RT13_9ROSI	V4TEJ0_9ROSI	V4RT13	V4TEJ0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.447
V4RT13_9ROSI	V4TIQ4_9ROSI	V4RT13	V4TIQ4	Ubiquitin-like domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.434
V4RT13_9ROSI	V4TQJ3_9ROSI	V4RT13	V4TQJ3	Ubiquitin-like domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.434
V4RT13_9ROSI	V4UYZ0_9ROSI	V4RT13	V4UYZ0	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.434
V4RT13_9ROSI	V4VGA7_9ROSI	V4RT13	V4VGA7	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.900
V4RT13_9ROSI	V4VLY3_9ROSI	V4RT13	V4VLY3	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.596
V4RT13_9ROSI	V4VU62_9ROSI	V4RT13	V4VU62	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.447
V4RVR7_9ROSI	V4RT13_9ROSI	V4RVR7	V4RT13	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.447
V4RVR7_9ROSI	V4SB24_9ROSI	V4RVR7	V4SB24	Uncharacterized protein.	Uncharacterized protein.	0.620
V4RVR7_9ROSI	V4SB31_9ROSI	V4RVR7	V4SB31	Uncharacterized protein.	UmuC domain-containing protein.	0.620
V4RVR7_9ROSI	V4SD56_9ROSI	V4RVR7	V4SD56	Uncharacterized protein.	Uncharacterized protein.	0.518
V4RVR7_9ROSI	V4SDL5_9ROSI	V4RVR7	V4SDL5	Uncharacterized protein.	Ribosomal_S27 domain-containing protein.	0.447