20 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4T2P9_9ROSI	AAA domain-containing protein. (1204 aa)
	V4TCV9_9ROSI	AAA domain-containing protein. (382 aa)
	V4TEJ0_9ROSI	Uncharacterized protein. (742 aa)
	V4VU62_9ROSI	AAA domain-containing protein. (354 aa)
	V4VLY3_9ROSI	AAA domain-containing protein. (331 aa)
	V4UYZ0_9ROSI	AAA domain-containing protein. (1268 aa)
	V4TQJ3_9ROSI	DNA_pol3_gamma3 domain-containing protein. (1199 aa)
	V4TN43_9ROSI	Uncharacterized protein. (453 aa)
	V4TIA0_9ROSI	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (620 aa)
	V4TIQ4_9ROSI	DNA_pol3_gamma3 domain-containing protein. (862 aa)
	V4SQX6_9ROSI	DNA_pol_D_N domain-containing protein. (252 aa)
	V4SQ01_9ROSI	DNA polymerase. (1513 aa)
	V4SEQ3_9ROSI	Replication factor C subunit 1. (958 aa)
	V4SCI8_9ROSI	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	V4S6M2_9ROSI	DNA_pol_E_B domain-containing protein. (209 aa)
	V4RVR7_9ROSI	Uncharacterized protein. (767 aa)
	V4SXG4_9ROSI	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (451 aa)
	V4T2V7_9ROSI	AAA domain-containing protein. (364 aa)
	V4TBM0_9ROSI	Uncharacterized protein. (122 aa)
	V4RRA1_9ROSI	PCNA_C domain-containing protein. (113 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RRA1_9ROSI	V4RVR7_9ROSI	V4RRA1	V4RVR7	PCNA_C domain-containing protein.	Uncharacterized protein.	0.966
V4RRA1_9ROSI	V4S6M2_9ROSI	V4RRA1	V4S6M2	PCNA_C domain-containing protein.	DNA_pol_E_B domain-containing protein.	0.962
V4RRA1_9ROSI	V4SEQ3_9ROSI	V4RRA1	V4SEQ3	PCNA_C domain-containing protein.	Replication factor C subunit 1.	0.963
V4RRA1_9ROSI	V4SQ01_9ROSI	V4RRA1	V4SQ01	PCNA_C domain-containing protein.	DNA polymerase.	0.962
V4RRA1_9ROSI	V4SQX6_9ROSI	V4RRA1	V4SQX6	PCNA_C domain-containing protein.	DNA_pol_D_N domain-containing protein.	0.962
V4RRA1_9ROSI	V4SXG4_9ROSI	V4RRA1	V4SXG4	PCNA_C domain-containing protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.954
V4RRA1_9ROSI	V4T2P9_9ROSI	V4RRA1	V4T2P9	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.963
V4RRA1_9ROSI	V4T2V7_9ROSI	V4RRA1	V4T2V7	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.983
V4RRA1_9ROSI	V4TBM0_9ROSI	V4RRA1	V4TBM0	PCNA_C domain-containing protein.	Uncharacterized protein.	0.436
V4RRA1_9ROSI	V4TCV9_9ROSI	V4RRA1	V4TCV9	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.959
V4RRA1_9ROSI	V4TEJ0_9ROSI	V4RRA1	V4TEJ0	PCNA_C domain-containing protein.	Uncharacterized protein.	0.966
V4RRA1_9ROSI	V4TIA0_9ROSI	V4RRA1	V4TIA0	PCNA_C domain-containing protein.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.931
V4RRA1_9ROSI	V4TIQ4_9ROSI	V4RRA1	V4TIQ4	PCNA_C domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.959
V4RRA1_9ROSI	V4TN43_9ROSI	V4RRA1	V4TN43	PCNA_C domain-containing protein.	Uncharacterized protein.	0.949
V4RRA1_9ROSI	V4TQJ3_9ROSI	V4RRA1	V4TQJ3	PCNA_C domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.959
V4RRA1_9ROSI	V4UYZ0_9ROSI	V4RRA1	V4UYZ0	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.959
V4RRA1_9ROSI	V4VLY3_9ROSI	V4RRA1	V4VLY3	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.990
V4RRA1_9ROSI	V4VU62_9ROSI	V4RRA1	V4VU62	PCNA_C domain-containing protein.	AAA domain-containing protein.	0.966
V4RVR7_9ROSI	V4RRA1_9ROSI	V4RVR7	V4RRA1	Uncharacterized protein.	PCNA_C domain-containing protein.	0.966
V4RVR7_9ROSI	V4S6M2_9ROSI	V4RVR7	V4S6M2	Uncharacterized protein.	DNA_pol_E_B domain-containing protein.	0.716