19 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4RG42_9ROSI	CULLIN_2 domain-containing protein; Belongs to the cullin family. (744 aa)
	V4RML9_9ROSI	Uncharacterized protein; Belongs to the SKP1 family. (174 aa)
	V4RY64_9ROSI	RING-type domain-containing protein. (107 aa)
	V4S572_9ROSI	Uncharacterized protein; Belongs to the SKP1 family. (176 aa)
	V4SFP4_9ROSI	Uncharacterized protein; Belongs to the SKP1 family. (158 aa)
	V4V622_9ROSI	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (493 aa)
	V4SNG4_9ROSI	Uncharacterized protein; Belongs to the SKP1 family. (160 aa)
	V4SNJ9_9ROSI	Uncharacterized protein; Belongs to the SKP1 family. (168 aa)
	V4SRU6_9ROSI	Uncharacterized protein; Belongs to the SKP1 family. (161 aa)
	V4T5J0_9ROSI	Uncharacterized protein; Belongs to the SKP1 family. (158 aa)
	V4T6Z5_9ROSI	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (543 aa)
	V4TFF5_9ROSI	Skp1 domain-containing protein. (81 aa)
	V4THY6_9ROSI	Uncharacterized protein; Belongs to the SKP1 family. (126 aa)
	V4TJB2_9ROSI	Skp1 domain-containing protein. (86 aa)
	V4TKC5_9ROSI	Skp1 domain-containing protein. (92 aa)
	V4UIS4_9ROSI	RING-type domain-containing protein. (118 aa)
	V4U0D3_9ROSI	CULLIN_2 domain-containing protein; Belongs to the cullin family. (738 aa)
	V4U9L0_9ROSI	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (82 aa)
	V4UHI5_9ROSI	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (484 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RG42_9ROSI	V4RML9_9ROSI	V4RG42	V4RML9	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.914
V4RG42_9ROSI	V4RY64_9ROSI	V4RG42	V4RY64	CULLIN_2 domain-containing protein; Belongs to the cullin family.	RING-type domain-containing protein.	0.967
V4RG42_9ROSI	V4S572_9ROSI	V4RG42	V4S572	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.914
V4RG42_9ROSI	V4SFP4_9ROSI	V4RG42	V4SFP4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.914
V4RG42_9ROSI	V4SNG4_9ROSI	V4RG42	V4SNG4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.914
V4RG42_9ROSI	V4SNJ9_9ROSI	V4RG42	V4SNJ9	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.914
V4RG42_9ROSI	V4SRU6_9ROSI	V4RG42	V4SRU6	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.914
V4RG42_9ROSI	V4T5J0_9ROSI	V4RG42	V4T5J0	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.914
V4RG42_9ROSI	V4TFF5_9ROSI	V4RG42	V4TFF5	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Skp1 domain-containing protein.	0.914
V4RG42_9ROSI	V4THY6_9ROSI	V4RG42	V4THY6	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.914
V4RG42_9ROSI	V4TJB2_9ROSI	V4RG42	V4TJB2	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Skp1 domain-containing protein.	0.912
V4RG42_9ROSI	V4TKC5_9ROSI	V4RG42	V4TKC5	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Skp1 domain-containing protein.	0.912
V4RG42_9ROSI	V4U0D3_9ROSI	V4RG42	V4U0D3	CULLIN_2 domain-containing protein; Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.900
V4RG42_9ROSI	V4U9L0_9ROSI	V4RG42	V4U9L0	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.914
V4RG42_9ROSI	V4UIS4_9ROSI	V4RG42	V4UIS4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	RING-type domain-containing protein.	0.967
V4RML9_9ROSI	V4RG42_9ROSI	V4RML9	V4RG42	Uncharacterized protein; Belongs to the SKP1 family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.914
V4RML9_9ROSI	V4RY64_9ROSI	V4RML9	V4RY64	Uncharacterized protein; Belongs to the SKP1 family.	RING-type domain-containing protein.	0.963
V4RML9_9ROSI	V4T6Z5_9ROSI	V4RML9	V4T6Z5	Uncharacterized protein; Belongs to the SKP1 family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.402
V4RML9_9ROSI	V4U0D3_9ROSI	V4RML9	V4U0D3	Uncharacterized protein; Belongs to the SKP1 family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.955
V4RML9_9ROSI	V4UHI5_9ROSI	V4RML9	V4UHI5	Uncharacterized protein; Belongs to the SKP1 family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.402