7 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4RXS5_9ROSI	HECT domain-containing protein. (1028 aa)
	V4ST42_9ROSI	HECT domain-containing protein. (1523 aa)
	V4TBL9_9ROSI	Uncharacterized protein. (3700 aa)
	V4TZ33_9ROSI	Uncharacterized protein. (3775 aa)
	V4U9A0_9ROSI	HECT domain-containing protein. (1881 aa)
	V4UFX8_9ROSI	Uncharacterized protein. (889 aa)
	V4UV66_9ROSI	HECT domain-containing protein. (759 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RXS5_9ROSI	V4ST42_9ROSI	V4RXS5	V4ST42	HECT domain-containing protein.	HECT domain-containing protein.	0.861
V4RXS5_9ROSI	V4TBL9_9ROSI	V4RXS5	V4TBL9	HECT domain-containing protein.	Uncharacterized protein.	0.427
V4RXS5_9ROSI	V4TZ33_9ROSI	V4RXS5	V4TZ33	HECT domain-containing protein.	Uncharacterized protein.	0.427
V4RXS5_9ROSI	V4U9A0_9ROSI	V4RXS5	V4U9A0	HECT domain-containing protein.	HECT domain-containing protein.	0.855
V4ST42_9ROSI	V4RXS5_9ROSI	V4ST42	V4RXS5	HECT domain-containing protein.	HECT domain-containing protein.	0.861
V4ST42_9ROSI	V4TBL9_9ROSI	V4ST42	V4TBL9	HECT domain-containing protein.	Uncharacterized protein.	0.821
V4ST42_9ROSI	V4TZ33_9ROSI	V4ST42	V4TZ33	HECT domain-containing protein.	Uncharacterized protein.	0.821
V4ST42_9ROSI	V4U9A0_9ROSI	V4ST42	V4U9A0	HECT domain-containing protein.	HECT domain-containing protein.	0.905
V4ST42_9ROSI	V4UFX8_9ROSI	V4ST42	V4UFX8	HECT domain-containing protein.	Uncharacterized protein.	0.759
V4ST42_9ROSI	V4UV66_9ROSI	V4ST42	V4UV66	HECT domain-containing protein.	HECT domain-containing protein.	0.628
V4TBL9_9ROSI	V4RXS5_9ROSI	V4TBL9	V4RXS5	Uncharacterized protein.	HECT domain-containing protein.	0.427
V4TBL9_9ROSI	V4ST42_9ROSI	V4TBL9	V4ST42	Uncharacterized protein.	HECT domain-containing protein.	0.821
V4TBL9_9ROSI	V4U9A0_9ROSI	V4TBL9	V4U9A0	Uncharacterized protein.	HECT domain-containing protein.	0.818
V4TZ33_9ROSI	V4RXS5_9ROSI	V4TZ33	V4RXS5	Uncharacterized protein.	HECT domain-containing protein.	0.427
V4TZ33_9ROSI	V4ST42_9ROSI	V4TZ33	V4ST42	Uncharacterized protein.	HECT domain-containing protein.	0.821
V4TZ33_9ROSI	V4U9A0_9ROSI	V4TZ33	V4U9A0	Uncharacterized protein.	HECT domain-containing protein.	0.818
V4U9A0_9ROSI	V4RXS5_9ROSI	V4U9A0	V4RXS5	HECT domain-containing protein.	HECT domain-containing protein.	0.855
V4U9A0_9ROSI	V4ST42_9ROSI	V4U9A0	V4ST42	HECT domain-containing protein.	HECT domain-containing protein.	0.905
V4U9A0_9ROSI	V4TBL9_9ROSI	V4U9A0	V4TBL9	HECT domain-containing protein.	Uncharacterized protein.	0.818
V4U9A0_9ROSI	V4TZ33_9ROSI	V4U9A0	V4TZ33	HECT domain-containing protein.	Uncharacterized protein.	0.818