STRINGSTRING
FEN1 FEN1 V4RVR7_9ROSI V4RVR7_9ROSI V4SB42_9ROSI V4SB42_9ROSI V4SCI8_9ROSI V4SCI8_9ROSI V4SEQ3_9ROSI V4SEQ3_9ROSI V4SF43_9ROSI V4SF43_9ROSI V4SFA7_9ROSI V4SFA7_9ROSI V4SI23_9ROSI V4SI23_9ROSI V4SJ41_9ROSI V4SJ41_9ROSI V4SQ01_9ROSI V4SQ01_9ROSI V4SQX6_9ROSI V4SQX6_9ROSI V4SXG4_9ROSI V4SXG4_9ROSI V4T2V7_9ROSI V4T2V7_9ROSI V4T327_9ROSI V4T327_9ROSI V4T333_9ROSI V4T333_9ROSI V4T8C5_9ROSI V4T8C5_9ROSI V4TBM0_9ROSI V4TBM0_9ROSI V4TCV9_9ROSI V4TCV9_9ROSI V4TEJ0_9ROSI V4TEJ0_9ROSI V4TF10_9ROSI V4TF10_9ROSI V4TIA0_9ROSI V4TIA0_9ROSI V4TJ75_9ROSI V4TJ75_9ROSI V4TMQ6_9ROSI V4TMQ6_9ROSI V4TMU6_9ROSI V4TMU6_9ROSI V4TN43_9ROSI V4TN43_9ROSI V4TN91_9ROSI V4TN91_9ROSI V4TQK0_9ROSI V4TQK0_9ROSI V4TS61_9ROSI V4TS61_9ROSI V4TY17_9ROSI V4TY17_9ROSI V4TYR3_9ROSI V4TYR3_9ROSI V4U0K8_9ROSI V4U0K8_9ROSI MCM7 MCM7 V4UFF5_9ROSI V4UFF5_9ROSI V4UL71_9ROSI V4UL71_9ROSI V4UUR9_9ROSI V4UUR9_9ROSI V4VLY3_9ROSI V4VLY3_9ROSI V4VMU2_9ROSI V4VMU2_9ROSI V4VU62_9ROSI V4VU62_9ROSI V4W5P4_9ROSI V4W5P4_9ROSI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (416 aa)
V4RVR7_9ROSIUncharacterized protein. (767 aa)
V4SB42_9ROSIDNA ligase. (754 aa)
V4SCI8_9ROSIProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
V4SEQ3_9ROSIReplication factor C subunit 1. (958 aa)
V4SF43_9ROSICBFD_NFYB_HMF domain-containing protein. (143 aa)
V4SFA7_9ROSIDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2206 aa)
V4SI23_9ROSIDNA helicase; Belongs to the MCM family. (846 aa)
V4SJ41_9ROSIDNA helicase; Belongs to the MCM family. (932 aa)
V4SQ01_9ROSIDNA polymerase. (1513 aa)
V4SQX6_9ROSIDNA_pol_D_N domain-containing protein. (252 aa)
V4SXG4_9ROSIDNA primase; Belongs to the eukaryotic-type primase small subunit family. (451 aa)
V4T2V7_9ROSIAAA domain-containing protein. (364 aa)
V4T327_9ROSIDNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
V4T333_9ROSIDNA ligase. (1402 aa)
V4T8C5_9ROSIReplication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (858 aa)
V4TBM0_9ROSIUncharacterized protein. (122 aa)
V4TCV9_9ROSIAAA domain-containing protein. (382 aa)
V4TEJ0_9ROSIUncharacterized protein. (742 aa)
V4TF10_9ROSIRibonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (297 aa)
V4TIA0_9ROSIDNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (620 aa)
V4TJ75_9ROSIUncharacterized protein. (137 aa)
V4TMQ6_9ROSIUncharacterized protein. (283 aa)
V4TMU6_9ROSIDNA helicase; Belongs to the MCM family. (834 aa)
V4TN43_9ROSIUncharacterized protein. (453 aa)
V4TN91_9ROSIUncharacterized protein. (169 aa)
V4TQK0_9ROSIReplication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (623 aa)
V4TS61_9ROSIUncharacterized protein. (280 aa)
V4TY17_9ROSIPOLAc domain-containing protein. (1164 aa)
V4TYR3_9ROSIUncharacterized protein. (955 aa)
V4U0K8_9ROSIUncharacterized protein. (570 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (619 aa)
V4UFF5_9ROSIDNA helicase; Belongs to the MCM family. (768 aa)
V4UL71_9ROSIDNA helicase; Belongs to the MCM family. (726 aa)
V4UUR9_9ROSIUncharacterized protein. (107 aa)
V4VLY3_9ROSIAAA domain-containing protein. (331 aa)
V4VMU2_9ROSIUncharacterized protein. (219 aa)
V4VU62_9ROSIAAA domain-containing protein. (354 aa)
V4W5P4_9ROSIUncharacterized protein. (442 aa)
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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