STRINGSTRING
FEN1 FEN1 V4S0V4_9ROSI V4S0V4_9ROSI V4S598_9ROSI V4S598_9ROSI V4S5B1_9ROSI V4S5B1_9ROSI V4SB42_9ROSI V4SB42_9ROSI V4SCI8_9ROSI V4SCI8_9ROSI V4SDT1_9ROSI V4SDT1_9ROSI V4SF43_9ROSI V4SF43_9ROSI V4SF72_9ROSI V4SF72_9ROSI V4SFA7_9ROSI V4SFA7_9ROSI V4SIE9_9ROSI V4SIE9_9ROSI V4SJ82_9ROSI V4SJ82_9ROSI V4SJG7_9ROSI V4SJG7_9ROSI V4SP53_9ROSI V4SP53_9ROSI V4SQX6_9ROSI V4SQX6_9ROSI V4SVX9_9ROSI V4SVX9_9ROSI V4SYH7_9ROSI V4SYH7_9ROSI V4T327_9ROSI V4T327_9ROSI V4T333_9ROSI V4T333_9ROSI V4T4U5_9ROSI V4T4U5_9ROSI V4TBM0_9ROSI V4TBM0_9ROSI V4TCS2_9ROSI V4TCS2_9ROSI NTH1 NTH1 V4TUD5_9ROSI V4TUD5_9ROSI NTH1-2 NTH1-2 V4TY17_9ROSI V4TY17_9ROSI V4U0K8_9ROSI V4U0K8_9ROSI V4U0Q6_9ROSI V4U0Q6_9ROSI V4U5E3_9ROSI V4U5E3_9ROSI V4U5Z7_9ROSI V4U5Z7_9ROSI V4UAI5_9ROSI V4UAI5_9ROSI V4UHN1_9ROSI V4UHN1_9ROSI V4ULR1_9ROSI V4ULR1_9ROSI V4UR90_9ROSI V4UR90_9ROSI V4V812_9ROSI V4V812_9ROSI V4VGR5_9ROSI V4VGR5_9ROSI V4W5P4_9ROSI V4W5P4_9ROSI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (416 aa)
V4S0V4_9ROSIUncharacterized protein. (225 aa)
V4S598_9ROSIUncharacterized protein. (420 aa)
V4S5B1_9ROSIHMG box domain-containing protein. (186 aa)
V4SB42_9ROSIDNA ligase. (754 aa)
V4SCI8_9ROSIProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
V4SDT1_9ROSIDNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (632 aa)
V4SF43_9ROSICBFD_NFYB_HMF domain-containing protein. (143 aa)
V4SF72_9ROSIPoly [ADP-ribose] polymerase. (734 aa)
V4SFA7_9ROSIDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2206 aa)
V4SIE9_9ROSIENDO3c domain-containing protein. (354 aa)
V4SJ82_9ROSIENDO3c domain-containing protein. (284 aa)
V4SJG7_9ROSIUncharacterized protein. (439 aa)
V4SP53_9ROSIFPG_CAT domain-containing protein. (408 aa)
V4SQX6_9ROSIDNA_pol_D_N domain-containing protein. (252 aa)
V4SVX9_9ROSIUncharacterized protein. (269 aa)
V4SYH7_9ROSIENDO3c domain-containing protein. (281 aa)
V4T327_9ROSIDNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
V4T333_9ROSIDNA ligase. (1402 aa)
V4T4U5_9ROSIUncharacterized protein. (320 aa)
V4TBM0_9ROSIUncharacterized protein. (122 aa)
V4TCS2_9ROSIUncharacterized protein. (317 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (357 aa)
V4TUD5_9ROSIPoly [ADP-ribose] polymerase. (996 aa)
NTH1-2Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (357 aa)
V4TY17_9ROSIPOLAc domain-containing protein. (1164 aa)
V4U0K8_9ROSIUncharacterized protein. (570 aa)
V4U0Q6_9ROSIPoly [ADP-ribose] polymerase. (626 aa)
V4U5E3_9ROSIDNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (310 aa)
V4U5Z7_9ROSIUncharacterized protein. (301 aa)
V4UAI5_9ROSIAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (456 aa)
V4UHN1_9ROSIUncharacterized protein. (375 aa)
V4ULR1_9ROSIBRCT domain-containing protein. (402 aa)
V4UR90_9ROSIUncharacterized protein. (385 aa)
V4V812_9ROSIENDO3c domain-containing protein. (373 aa)
V4VGR5_9ROSIBRCT domain-containing protein; Belongs to the DNA polymerase type-X family. (538 aa)
V4W5P4_9ROSIUncharacterized protein. (442 aa)
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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