31 items (Citrus clementina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4RVR7_9ROSI	Uncharacterized protein. (767 aa)
	V4SB42_9ROSI	DNA ligase. (754 aa)
	V4SCI8_9ROSI	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	V4SDV7_9ROSI	MUTSd domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (853 aa)
	V4SEQ3_9ROSI	Replication factor C subunit 1. (958 aa)
	V4SI40_9ROSI	Uncharacterized protein. (1493 aa)
	V4SQX6_9ROSI	DNA_pol_D_N domain-containing protein. (252 aa)
	V4T2V7_9ROSI	AAA domain-containing protein. (364 aa)
	V4T333_9ROSI	DNA ligase. (1402 aa)
	V4T8C5_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (858 aa)
	V4TB35_9ROSI	DNA_mis_repair domain-containing protein. (405 aa)
	V4TBM0_9ROSI	Uncharacterized protein. (122 aa)
	V4TBP7_9ROSI	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1288 aa)
	V4TCV9_9ROSI	AAA domain-containing protein. (382 aa)
	V4TEJ0_9ROSI	Uncharacterized protein. (742 aa)
	V4TJ75_9ROSI	Uncharacterized protein. (137 aa)
	V4TP73_9ROSI	DNA_mis_repair domain-containing protein. (735 aa)
	V4TPW2_9ROSI	Smr domain-containing protein. (835 aa)
	V4TQK0_9ROSI	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (623 aa)
	V4TS61_9ROSI	Uncharacterized protein. (280 aa)
	V4TWE1_9ROSI	TPR_REGION domain-containing protein. (570 aa)
	V4U0K8_9ROSI	Uncharacterized protein. (570 aa)
	V4UKH7_9ROSI	Uncharacterized protein. (646 aa)
	V4UUR9_9ROSI	Uncharacterized protein. (107 aa)
	V4VLY3_9ROSI	AAA domain-containing protein. (331 aa)
	V4VMU2_9ROSI	Uncharacterized protein. (219 aa)
	V4VMV3_9ROSI	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (938 aa)
	V4VU62_9ROSI	AAA domain-containing protein. (354 aa)
	V4VW34_9ROSI	MutL_C domain-containing protein. (400 aa)
	V4W5P4_9ROSI	Uncharacterized protein. (442 aa)
	V4WD14_9ROSI	DNA_MISMATCH_REPAIR_2 domain-containing protein. (1105 aa)

Your Current Organism:

Citrus clementina

NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4RVR7_9ROSI	V4SB42_9ROSI	V4RVR7	V4SB42	Uncharacterized protein.	DNA ligase.	0.734
V4RVR7_9ROSI	V4SCI8_9ROSI	V4RVR7	V4SCI8	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.966
V4RVR7_9ROSI	V4SEQ3_9ROSI	V4RVR7	V4SEQ3	Uncharacterized protein.	Replication factor C subunit 1.	0.956
V4RVR7_9ROSI	V4SQX6_9ROSI	V4RVR7	V4SQX6	Uncharacterized protein.	DNA_pol_D_N domain-containing protein.	0.716
V4RVR7_9ROSI	V4T2V7_9ROSI	V4RVR7	V4T2V7	Uncharacterized protein.	AAA domain-containing protein.	0.980
V4RVR7_9ROSI	V4T333_9ROSI	V4RVR7	V4T333	Uncharacterized protein.	DNA ligase.	0.780
V4RVR7_9ROSI	V4T8C5_9ROSI	V4RVR7	V4T8C5	Uncharacterized protein.	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.	0.518
V4RVR7_9ROSI	V4TBM0_9ROSI	V4RVR7	V4TBM0	Uncharacterized protein.	Uncharacterized protein.	0.404
V4RVR7_9ROSI	V4TCV9_9ROSI	V4RVR7	V4TCV9	Uncharacterized protein.	AAA domain-containing protein.	0.933
V4RVR7_9ROSI	V4TQK0_9ROSI	V4RVR7	V4TQK0	Uncharacterized protein.	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.	0.518
V4RVR7_9ROSI	V4TS61_9ROSI	V4RVR7	V4TS61	Uncharacterized protein.	Uncharacterized protein.	0.756
V4RVR7_9ROSI	V4TWE1_9ROSI	V4RVR7	V4TWE1	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.741
V4RVR7_9ROSI	V4UKH7_9ROSI	V4RVR7	V4UKH7	Uncharacterized protein.	Uncharacterized protein.	0.741
V4RVR7_9ROSI	V4VLY3_9ROSI	V4RVR7	V4VLY3	Uncharacterized protein.	AAA domain-containing protein.	0.980
V4RVR7_9ROSI	V4VMV3_9ROSI	V4RVR7	V4VMV3	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.425
V4RVR7_9ROSI	V4W5P4_9ROSI	V4RVR7	V4W5P4	Uncharacterized protein.	Uncharacterized protein.	0.734
V4SB42_9ROSI	V4RVR7_9ROSI	V4SB42	V4RVR7	DNA ligase.	Uncharacterized protein.	0.734
V4SB42_9ROSI	V4SCI8_9ROSI	V4SB42	V4SCI8	DNA ligase.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.962
V4SB42_9ROSI	V4SDV7_9ROSI	V4SB42	V4SDV7	DNA ligase.	MUTSd domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.482
V4SB42_9ROSI	V4SEQ3_9ROSI	V4SB42	V4SEQ3	DNA ligase.	Replication factor C subunit 1.	0.778