STRINGSTRING
AEG00113.1 AEG00113.1 AEG00325.1 AEG00325.1 AEG00859.1 AEG00859.1 AEG01839.1 AEG01839.1 AEG01840.1 AEG01840.1 AEG01841.1 AEG01841.1 AEG01843.1 AEG01843.1 AEG01844.1 AEG01844.1 AEG01845.1 AEG01845.1 AEG01847.1 AEG01847.1 AEG01848.1 AEG01848.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEG00113.1PFAM: Fatty acid hydroxylase; KEGG: nhl:Nhal_0450 fatty acid hydroxylase. (275 aa)
AEG00325.1KEGG: mca:MCA0810 hypothetical protein; manually curated; TIGRFAM: Hopanoid biosynthesis associated RND transporter like protein HpnN. (872 aa)
AEG00859.1TIGRFAM: Hopene cyclase; Squalene cyclase; KEGG: mca:MCA0812 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase. (669 aa)
AEG01839.1KEGG: nmu:Nmul_A2560 radical SAM family protein; TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM. (366 aa)
AEG01840.1PFAM: Squalene/phytoene synthase; KEGG: mca:MCA0813 squalene synthase. (363 aa)
AEG01841.1TIGRFAM: Hopene cyclase; Squalene cyclase; KEGG: mca:MCA0812 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase. (653 aa)
AEG01843.1KEGG: mca:MCA0809 acetylornithine aminotransferase, putative; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (461 aa)
AEG01844.1KEGG: mca:MCA0808 hypothetical protein. (119 aa)
AEG01845.1PFAM: Copper resistance D; KEGG: mca:MCA0807 copper resistance protein. (543 aa)
AEG01847.1PFAM: Acyltransferase 3; KEGG: pbr:PB2503_06782 acyltransferase 3 family protein. (360 aa)
AEG01848.1KEGG: ppm:PPSC2_c0818 lipolytic protein g-D-S-l family. (230 aa)
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.