STRINGSTRING
AEF98887.1 AEF98887.1 AEF98888.1 AEF98888.1 AEF99457.1 AEF99457.1 AEF99458.1 AEF99458.1 AEF99459.1 AEF99459.1 AEF99462.1 AEF99462.1 AEF99463.1 AEF99463.1 AEF99464.1 AEF99464.1 AEF99465.1 AEF99465.1 AEF99466.1 AEF99466.1 AEF99467.1 AEF99467.1 flgH flgH flgI flgI AEF99470.1 AEF99470.1 flgK flgK AEF99472.1 AEF99472.1 AEF99736.1 AEF99736.1 AEG00683.1 AEG00683.1 AEG00684.1 AEG00684.1 AEG00700.1 AEG00700.1 AEG01331.1 AEG01331.1 AEG01332.1 AEG01332.1 AEG01333.1 AEG01333.1 AEG01334.1 AEG01334.1 AEG01335.1 AEG01335.1 AEG01336.1 AEG01336.1 fliE fliE AEG02326.1 AEG02326.1 AEG02339.1 AEG02339.1 AEG02340.1 AEG02340.1 AEG02342.1 AEG02342.1 AEG02411.1 AEG02411.1 AEG02412.1 AEG02412.1 fliA fliA flhA flhA flhB flhB AEG02421.1 AEG02421.1 fliQ fliQ fliP fliP AEG02424.1 AEG02424.1 AEG02425.1 AEG02425.1 AEG02426.1 AEG02426.1 AEG02427.1 AEG02427.1 AEG02520.1 AEG02520.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEF98887.1PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: slt:Slit_0543 OmpA/MotB domain protein. (306 aa)
AEF98888.1KEGG: hse:Hsero_2986 flagellar motor component protein; TIGRFAM: flagellar motor stator protein MotA; PFAM: MotA/TolQ/ExbB proton channel. (282 aa)
AEF99457.1FlgN family protein; PFAM: FlgN; KEGG: har:HEAR1904 putative flagella synthesis protein FlgN. (164 aa)
AEF99458.1TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor, FlgM. (103 aa)
AEF99459.1Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (230 aa)
AEF99462.1Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (130 aa)
AEF99463.1KEGG: pat:Patl_3099 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family. (138 aa)
AEF99464.1Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (226 aa)
AEF99465.1KEGG: xal:XALc_1425 flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal. (427 aa)
AEF99466.1KEGG: hch:HCH_04478 flagellar basal body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; Belongs to the flagella basal body rod proteins family. (249 aa)
AEF99467.1KEGG: nwa:Nwat_2219 flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family. (262 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (222 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (366 aa)
AEF99470.1Flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: Flagellar protein FlgJ type-2; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal; KEGG: swd:Swoo_1605 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2. (343 aa)
flgKKEGG: csa:Csal_1969 flagellar hook-associated protein; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal. (553 aa)
AEF99472.1KEGG: net:Neut_0345 flagellar hook-associated protein FlgL; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal. (304 aa)
AEF99736.1KEGG: mmw:Mmwyl1_3416 hypothetical protein. (496 aa)
AEG00683.1PFAM: MotA/TolQ/ExbB proton channel; KEGG: alv:Alvin_2821 MotA/TolQ/ExbB proton channel. (250 aa)
AEG00684.1PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nwa:Nwat_2274 OmpA/MotB domain-containing protein. (292 aa)
AEG00700.1Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (132 aa)
AEG01331.1PFAM: Flagellar hook-length control protein; KEGG: psa:PST_2582 flagellar hook-length control protein FliK. (439 aa)
AEG01332.1TIGRFAM: Flagellar export FliJ; KEGG: pag:PLES_42161 flagellar biosynthesis chaperone. (150 aa)
AEG01333.1TIGRFAM: Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: aeh:Mlg_0712 flagellar protein export ATPase FliI; SMART: ATPase, AAA+ type, core. (449 aa)
AEG01334.1PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: aeh:Mlg_0711 flagellar assembly protein FliH. (243 aa)
AEG01335.1Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (336 aa)
AEG01336.1Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (580 aa)
fliETIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: tgr:Tgr7_1970 flagellar hook-basal body protein FliE; PFAM: Flagellar hook-basal body complex protein FliE. (104 aa)
AEG02326.1Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (284 aa)
AEG02339.1KEGG: cja:CJA_1701 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS. (128 aa)
AEG02340.1Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (471 aa)
AEG02342.1Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (282 aa)
AEG02411.1PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nhl:Nhal_3607 OmpA/MotB domain protein. (305 aa)
AEG02412.1PFAM: MotA/TolQ/ExbB proton channel; KEGG: ppg:PputGB1_3905 flagellar motor protein. (248 aa)
fliARNA polymerase, sigma 28 subunit, FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (243 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (701 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (375 aa)
AEG02421.1Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (258 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (251 aa)
AEG02424.1KEGG: tcx:Tcr_0739 flagellar biosynthesis protein, FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; PFAM: Flagellar biosynthesis protein, FliO. (146 aa)
AEG02425.1Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (150 aa)
AEG02426.1Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (326 aa)
AEG02427.1Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (173 aa)
AEG02520.1PFAM: PKD; KEGG: dal:Dalk_2289 PKD domain containing protein. (1090 aa)
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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