STRINGSTRING
AEF99745.1 AEF99745.1 AEF99746.1 AEF99746.1 AEF99749.1 AEF99749.1 AEF99750.1 AEF99750.1 AEF99751.1 AEF99751.1 AEF99752.1 AEF99752.1 AEF99753.1 AEF99753.1 AEF99755.1 AEF99755.1 AEF99756.1 AEF99756.1 AEF99757.1 AEF99757.1 AEF99758.1 AEF99758.1 AEF99759.1 AEF99759.1 AEF99762.1 AEF99762.1 AEF99763.1 AEF99763.1 AEF99764.1 AEF99764.1 AEF99765.1 AEF99765.1 AEF99766.1 AEF99766.1 AEF99767.1 AEF99767.1 AEG01549.1 AEG01549.1 AEG01550.1 AEG01550.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEF99745.1Two component, sigma54 specific, transcriptional regulator, Fis family; TIGRFAM: Signal transduction response regulator, PEP-CTERM system, putative; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; KEGG: tgr:Tgr7_2349 response regulator receiver protein; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core. (457 aa)
AEF99746.1TIGRFAM: Signal transduction histidine kinase, PEP-CTERM system, putative; PFAM: ATP-binding region, ATPase-like; KEGG: tkm:TK90_2497 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like. (694 aa)
AEF99749.1PFAM: Polysaccharide export protein; KEGG: tgr:Tgr7_2392 polysaccharide export protein. (238 aa)
AEF99750.1KEGG: nhl:Nhal_3244 polysaccharide chain length determinant protein, PEP-Cterm locus subfamily; TIGRFAM: PEP-CTERM locus polysaccharide chain length determinant; PFAM: Lipopolysaccharide biosynthesis. (509 aa)
AEF99751.1KEGG: dar:Daro_2399 exopolysaccharide biosynthesis protein. (297 aa)
AEF99752.1TIGRFAM: PEP-CTERM, conserved hypothetical protein CHP03016; KEGG: tbd:Tbd_0284 hypothetical protein. (531 aa)
AEF99753.1KEGG: noc:Noc_2016 ATPase; TIGRFAM: ATPase, secretion system, PEP-CTERM, predicted; SMART: ATPase, AAA+ type, core. (341 aa)
AEF99755.1KEGG: rru:Rru_A3114 polysaccharide deacetylase; TIGRFAM: PEP-CTERM locus, polysaccharide deactylase; PFAM: Polysaccharide deacetylase. (288 aa)
AEF99756.1TIGRFAM: PEP-CTERM system-associated, FemAB-related; KEGG: noc:Noc_1980 hypothetical protein. (339 aa)
AEF99757.1Sugar transferase, PEP-CTERM/EpsH1 system associated; KEGG: net:Neut_0898 glycosyl transferase, group 1; TIGRFAM: Sugar transferase, PEP-CTERM, Stp1; PFAM: Glycosyl transferase, group 1. (404 aa)
AEF99758.1KEGG: nhl:Nhal_3237 sugar transferase, PEP-Cterm/EpsH1 system associated; TIGRFAM: Sugar transferase, PEP-CTERM, Stp2; PFAM: Glycosyl transferase, group 1. (382 aa)
AEF99759.1TIGRFAM: Exosortase 1 system-associated amidotransferase 1; Asparagine synthase, glutamine-hydrolyzing; KEGG: nmu:Nmul_A2519 asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II. (628 aa)
AEF99762.1HPr kinase; KEGG: aeh:Mlg_0102 HPr kinase. (292 aa)
AEF99763.1KEGG: rfr:Rfer_0709 hypothetical protein. (366 aa)
AEF99764.1PFAM: Glycosyl transferase, group 1; KEGG: neu:NE0794 glycosyl transferase group 1. (399 aa)
AEF99765.1PFAM: Glycosyl transferase, group 1; KEGG: rru:Rru_A3107 glycosyl transferase, group 1. (383 aa)
AEF99766.1PFAM: Glycosyl transferase, group 1; KEGG: rru:Rru_A3096 glycosyl transferase, group 1. (395 aa)
AEF99767.1PFAM: Asparagine synthase; KEGG: nhl:Nhal_3222 asparagine synthase (glutamine-hydrolyzing). (594 aa)
AEG01549.1PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: nmu:Nmul_A0374 UBA/ThiF-type NAD/FAD binding fold. (289 aa)
AEG01550.1TIGRFAM: putative PEP-CTERM/exosortase system-associated acyltransferase; KEGG: aeh:Mlg_0150 hypothetical protein. (252 aa)
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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