STRINGSTRING
AEG02197.1 AEG02197.1 AEG02603.1 AEG02603.1 AEG02604.1 AEG02604.1 nqrE nqrE nqrB nqrB AEG01298.1 AEG01298.1 AEG01443.1 AEG01443.1 AEG01527.1 AEG01527.1 AEG00194.1 AEG00194.1 AEG00184.1 AEG00184.1 AEG00006.1 AEG00006.1 AEG00005.1 AEG00005.1 AEG00004.1 AEG00004.1 AEG00003.1 AEG00003.1 AEG00196.1 AEG00196.1 AEG00002.1 AEG00002.1 AEF99987.1 AEF99987.1 AEF99705.1 AEF99705.1 AEF99118.1 AEF99118.1 AEF98971.1 AEF98971.1 AEF98969.1 AEF98969.1 AEF98968.1 AEF98968.1 AEF98967.1 AEF98967.1 AEF98698.1 AEF98698.1 AEF98696.1 AEF98696.1 AEG01679.1 AEG01679.1 AEG01680.1 AEG01680.1 AEG01682.1 AEG01682.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEG02197.1NADH/Ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; KEGG: sli:Slin_1125 NADH dehydrogenase (quinone). (629 aa)
AEG02603.1KEGG: ttu:TERTU_4035 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II. (378 aa)
AEG02604.1PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: swp:swp_1469 cytochrome bd ubiquinol oxidase subunit I. (463 aa)
nqrENa(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. (202 aa)
nqrBNADH:ubiquinone oxidoreductase, subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol. (399 aa)
AEG01298.1KEGG: slt:Slit_0172 cytochrome b561. (189 aa)
AEG01443.1KEGG: amc:MADE_02672 cytochrome b561, putative. (184 aa)
AEG01527.1KEGG: mca:MCA0883 cytochrome c oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III. (291 aa)
AEG00194.1TIGRFAM: Nickel-dependent hydrogenase b-type cytochrome subunit; KEGG: tin:Tint_3075 Ni/Fe-hydrogenase, b-type cytochrome subunit. (231 aa)
AEG00184.1KEGG: mgm:Mmc1_2497 Ni,Fe-hydrogenase I large subunit. (395 aa)
AEG00006.1NADH dehydrogenase (quinone); KEGG: mca:MCA1142 hydrogenase 4 subunit B; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase. (706 aa)
AEG00005.1KEGG: mca:MCA1141 hydrogenase subunit. (314 aa)
AEG00004.1KEGG: mca:MCA1140 hydrogenase subunit. (225 aa)
AEG00003.1NADH dehydrogenase (quinone); KEGG: mca:MCA1139 hydrogenase 4 subunit F; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase. (487 aa)
AEG00196.1KEGG: rva:Rvan_0965 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (598 aa)
AEG00002.1PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; KEGG: mca:MCA1138 hydrogenase subunit. (527 aa)
AEF99987.1KEGG: lch:Lcho_1348 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit. (509 aa)
AEF99705.1KEGG: bmr:BMI_I47 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: Cytochrome o ubiquinol oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III. (211 aa)
AEF99118.1Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (465 aa)
AEF98971.1TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: nhl:Nhal_2897 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase. (490 aa)
AEF98969.1NADH dehydrogenase (quinone); KEGG: mca:MCA0513 NADH ubiquinone/plastoquinone complex subunit, putative; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase. (525 aa)
AEF98968.1TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: noc:Noc_1249 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase. (512 aa)
AEF98967.1TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: nhl:Nhal_2893 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase. (518 aa)
AEF98698.1KEGG: mca:MCA2725 NAD-reducing hydrogenase, gamma subunit; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin. (239 aa)
AEF98696.1KEGG: mca:MCA0114 NAD-reducing hydrogenase, beta subunit; PFAM: Nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (496 aa)
AEG01679.1KEGG: mca:MCA1107 cyd operon protein YbgT; TIGRFAM: Cyd operon protein YbgT; PFAM: Membrane bound YbgT-like. (47 aa)
AEG01680.1KEGG: mca:MCA1106 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II. (379 aa)
AEG01682.1PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: mca:MCA1105 cytochrome d ubiquinol oxidase, subunit I. (520 aa)
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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