STRINGSTRING
AEF98649.1 AEF98649.1 AEF99077.1 AEF99077.1 AEF99615.1 AEF99615.1 AEF99650.1 AEF99650.1 AEF99693.1 AEF99693.1 AEF99694.1 AEF99694.1 AEF99754.1 AEF99754.1 AEG00850.1 AEG00850.1 AEG01042.1 AEG01042.1 AEG01043.1 AEG01043.1 AEG01044.1 AEG01044.1 AEG01045.1 AEG01045.1 AEG02008.1 AEG02008.1 AEG02220.1 AEG02220.1 AEG02348.1 AEG02348.1 AEG02350.1 AEG02350.1 fcl fcl gmd gmd glmU glmU
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
AEF98649.1TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: tgr:Tgr7_2339 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal. (439 aa)
AEF99077.1TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: mca:MCA2203 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase. (293 aa)
AEF99615.1Glutamine--scyllo-inositol transaminase; KEGG: gbm:Gbem_2570 aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (372 aa)
AEF99650.1TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: amc:MADE_00967 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase, type II, C-terminal; Belongs to the mannose-6-phosphate isomerase type 2 family. (466 aa)
AEF99693.1UDP-glucuronate 5'-epimerase; KEGG: hch:HCH_04902 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase. (335 aa)
AEF99694.1Nucleotide sugar dehydrogenase; KEGG: prw:PsycPRwf_0249 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (423 aa)
AEF99754.1TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: aeh:Mlg_0109 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (383 aa)
AEG00850.1TIGRFAM: UDP-glucose 4-epimerase; KEGG: sde:Sde_0734 UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (348 aa)
AEG01042.1dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (183 aa)
AEG01043.1Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (294 aa)
AEG01044.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (300 aa)
AEG01045.1TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: ppg:PputGB1_1380 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (356 aa)
AEG02008.1TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: xac:XAC0044 lipopolysaccharide biosynthesis protein; PFAM: UDP-N-acetylglucosamine 2-epimerase. (363 aa)
AEG02220.1PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: cpb:Cphamn1_1902 phosphomannomutase. (480 aa)
AEG02348.1TIGRFAM: Pseudaminic acid biosynthesis, PseF; KEGG: aeh:Mlg_2324 acylneuraminate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase. (234 aa)
AEG02350.1UDP-N-acetylglucosamine 4,6-dehydratase; KEGG: nhl:Nhal_0393 polysaccharide biosynthesis protein CapD; TIGRFAM: Pseudaminic acid biosynthesis, PseB; PFAM: Polysaccharide biosynthesis protein CapD-like. (329 aa)
fclGDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (322 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (373 aa)
glmUBifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (456 aa)
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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