STRINGSTRING
AEF18016.1 AEF18016.1 AEF16537.1 AEF16537.1 AEF16835.1 AEF16835.1 AEF16593.1 AEF16593.1 AEF16985.1 AEF16985.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEF18016.1KEGG: ttm:Tthe_2359 PTS system transcriptional activator; PFAM: RNA polymerase sigma factor 54, interaction; Double-stranded RNA-specific adenosine deaminase (DRADA); PRD; Phosphotransferase system, fructose subfamily IIA component; SMART: ATPase, AAA+ type, core. (900 aa)
AEF16537.1Putative sigma54 specific transcriptional regulator; TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; KEGG: ttm:Tthe_0590 putative sigma54 specific transcriptional regulator; SMART: ATPase, AAA+ type, core; PAS. (546 aa)
AEF16835.1KEGG: ttm:Tthe_2473 PTS system transcriptional activator; PFAM: RNA polymerase sigma factor 54, interaction; PRD; Phosphotransferase system, fructose subfamily IIA component; SMART: ATPase, AAA+ type, core. (884 aa)
AEF16593.1KEGG: ttm:Tthe_0646 PTS system transcriptional activator; PFAM: RNA polymerase sigma factor 54, interaction; PRD; Phosphotransferase system, fructose subfamily IIA component; SMART: ATPase, AAA+ type, core. (906 aa)
AEF16985.1KEGG: thx:Thet_0156 PTS system transcriptional activator; PFAM: RNA polymerase sigma factor 54, interaction; PRD; Phosphotransferase system, fructose subfamily IIA component; Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; SMART: ATPase, AAA+ type, core. (975 aa)
Your Current Organism:
Thermoanaerobacterium xylanolyticum
NCBI taxonomy Id: 858215
Other names: T. xylanolyticum LX-11, Thermoanaerobacterium xylanolyticum DSM 7097, Thermoanaerobacterium xylanolyticum LX-11, Thermoanaerobacterium xylanolyticum str. LX-11, Thermoanaerobacterium xylanolyticum strain LX-11
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