Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CVAR_0553 | CVAR_1945 | CVAR_0553 | CVAR_1945 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Hypothetical protein; NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | 0.816 |
| CVAR_0553 | cat1 | CVAR_0553 | CVAR_0586 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | succinyl-CoA:Coenzyme A transferase; Acetyl-CoA hydrolase. | 0.525 |
| CVAR_0553 | cat2 | CVAR_0553 | CVAR_0587 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | succinyl-CoA:Coenzyme A transferase; Acetyl-CoA hydrolase. | 0.525 |
| CVAR_0553 | fum | CVAR_0553 | CVAR_1922 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Fumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.426 |
| CVAR_0553 | gabD3 | CVAR_0553 | CVAR_0908 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | 0.816 |
| CVAR_0553 | gabD4 | CVAR_0553 | CVAR_2958 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | NAD-dependent aldehyde dehydrogenases. | 0.816 |
| CVAR_0553 | gabD5 | CVAR_0553 | CVAR_0989 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | 0.816 |
| CVAR_0553 | gabD6 | CVAR_0553 | CVAR_0958 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | NAD-dependent aldehyde dehydrogenases. | 0.816 |
| CVAR_0553 | gltA | CVAR_0553 | CVAR_0632 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Citrate synthase; Belongs to the citrate synthase family. | 0.977 |
| CVAR_0553 | mdh | CVAR_0553 | CVAR_0899 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.961 |
| CVAR_0553 | mqo | CVAR_0553 | CVAR_1651 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Malate:quinone oxidoreductase; Predicted dehydrogenase. | 0.930 |
| CVAR_0553 | pck | CVAR_0553 | CVAR_0267 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. | 0.968 |
| CVAR_0553 | ppc | CVAR_0553 | CVAR_1480 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.985 |
| CVAR_0553 | purU | CVAR_0553 | CVAR_0895 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.800 |
| CVAR_1945 | CVAR_0553 | CVAR_1945 | CVAR_0553 | Hypothetical protein; NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.816 |
| CVAR_1945 | CVAR_2763 | CVAR_1945 | CVAR_2763 | Hypothetical protein; NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Succinate dehydrogenase subunit. | 0.655 |
| CVAR_1945 | cat1 | CVAR_1945 | CVAR_0586 | Hypothetical protein; NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | succinyl-CoA:Coenzyme A transferase; Acetyl-CoA hydrolase. | 0.907 |
| CVAR_1945 | cat2 | CVAR_1945 | CVAR_0587 | Hypothetical protein; NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | succinyl-CoA:Coenzyme A transferase; Acetyl-CoA hydrolase. | 0.907 |
| CVAR_1945 | fum | CVAR_1945 | CVAR_1922 | Hypothetical protein; NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Fumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.834 |
| CVAR_1945 | gltA | CVAR_1945 | CVAR_0632 | Hypothetical protein; NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.862 |
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