STRINGSTRING
betP1 betP1 CVAR_0040 CVAR_0040 proP proP CVAR_0131 CVAR_0131 CVAR_0146 CVAR_0146 lysI lysI CVAR_0432 CVAR_0432 CVAR_0499 CVAR_0499 CVAR_0500 CVAR_0500 CVAR_0501 CVAR_0501 CVAR_0563 CVAR_0563 CVAR_0692 CVAR_0692 CVAR_1002 CVAR_1002 citP citP citA citA citB citB CVAR_1043 CVAR_1043 ectP ectP betA1 betA1 betB betB betT1 betT1 glyP glyP CVAR_1730 CVAR_1730 CVAR_1731 CVAR_1731 pheP pheP metP metP metPS metPS CVAR_1916 CVAR_1916 CVAR_1917 CVAR_1917 xseA xseA CVAR_1919 CVAR_1919 CVAR_2059 CVAR_2059 betP3 betP3 rsmI rsmI CVAR_2511 CVAR_2511 betT2 betT2 betT3 betT3 CVAR_2514 CVAR_2514 amiB amiB CVAR_2679 CVAR_2679 CVAR_2680 CVAR_2680 CVAR_2681 CVAR_2681 gabD2 gabD2 gabR3 gabR3 betA2 betA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
betP1Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (601 aa)
CVAR_0040Hypothetical protein. (362 aa)
proPProline/betaine transporter; Permeases of the major facilitator superfamily. (570 aa)
CVAR_0131Putative membrane protein; Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (492 aa)
CVAR_0146Putative membrane protein; Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (424 aa)
lysIL-lysine transport protein; Amino acid transporters. (516 aa)
CVAR_0432Putative membrane protein. (252 aa)
CVAR_0499Hypothetical protein. (63 aa)
CVAR_0500Hypothetical protein. (69 aa)
CVAR_0501Hypothetical protein; Membrane protease subunits, stomatin/prohibitin homologs. (150 aa)
CVAR_0563Putative membrane protein; Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (477 aa)
CVAR_0692Putative membrane protein; Putative p-aminobenzoyl-glutamate transporter. (554 aa)
CVAR_1002Hypothetical protein. (252 aa)
citPH+/citrate symporter. (468 aa)
citATwo-component system sensor kinase; Signal transduction histidine kinase regulating citrate/malate metabolism. (538 aa)
citBResponse regulator of citrate/malate metabolism. (213 aa)
CVAR_1043Putative secreted protein. (248 aa)
ectPCholine-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (599 aa)
betA1Choline dehydrogenase and related flavoproteins. (523 aa)
betBNAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (479 aa)
betT1Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (713 aa)
glyPTransport protein of the alanine or glycine:cation symporter family; Na+/alanine symporter. (654 aa)
CVAR_1730Transposase for insertion sequence element; Transposase and inactivated derivatives. (141 aa)
CVAR_1731Putative membrane protein; Membrane transporters of cations and cationic drugs. (104 aa)
phePGamma-aminobutyrate permease and related permeases. (496 aa)
metPMethionine and alanine importer large subunit; Na+-dependent transporters of the SNF family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (549 aa)
metPSMethionine and alanine importer small subunit. (54 aa)
CVAR_1916Putative membrane protein; Predicted permease. (506 aa)
CVAR_1917Putative membrane protein; Gamma-aminobutyrate permease and related permeases. (267 aa)
xseAExodeoxyribonuclease large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (440 aa)
CVAR_1919Exodeoxyribonuclease small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (44 aa)
CVAR_2059Hypothetical protein; Choline-glycine betaine transporter. (95 aa)
betP3Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (512 aa)
rsmIHypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (307 aa)
CVAR_2511Hypothetical protein. (53 aa)
betT2Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (288 aa)
betT3Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (424 aa)
CVAR_2514Hypothetical protein. (201 aa)
amiBAminoacylase; Metal- dependentamidase/aminoacylase/carboxypeptidase; Belongs to the peptidase M20A family. (368 aa)
CVAR_2679Hypothetical protein. (229 aa)
CVAR_2680Hypothetical protein; Putative translation initiation inhibitor, yjgF family. (134 aa)
CVAR_2681Putative oxidoreductase; Predicted flavoprotein involved in K+ transport. (446 aa)
gabD2NAD-dependent aldehyde dehydrogenases. (457 aa)
gabR3Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (317 aa)
betA2Choline dehydrogenase and related flavoproteins. (529 aa)
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.