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pks13 pks13 fadA1 fadA1 pcaF pcaF fadA2 fadA2 fadA3 fadA3 mvaS mvaS fadA4 fadA4 fas fas fadA5 fadA5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pks13Polyketide synthase modules and related proteins. (1642 aa)
fadA1Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (411 aa)
pcaFAcetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (415 aa)
fadA2Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
fadA3Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (438 aa)
mvaS3-hydroxy-3-methylglutaryl CoA synthase. (395 aa)
fadA4Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
fasFatty acid synthase; Enoyl reductase domain of yeast-type FAS1. (3144 aa)
fadA5Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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