STRINGSTRING
dnaA dnaA tauA tauA CVAR_0095 CVAR_0095 CVAR_0105 CVAR_0105 CVAR_0106 CVAR_0106 CVAR_0110 CVAR_0110 CVAR_0141 CVAR_0141 CVAR_0145 CVAR_0145 CVAR_0157 CVAR_0157 CVAR_0167 CVAR_0167 CVAR_0185 CVAR_0185 CVAR_0186 CVAR_0186 CVAR_0228 CVAR_0228 fiuA2 fiuA2 CVAR_0294 CVAR_0294 fiuA4 fiuA4 clpB1 clpB1 CVAR_0382 CVAR_0382 CVAR_0405 CVAR_0405 CVAR_0435 CVAR_0435 CVAR_0450 CVAR_0450 ftsH ftsH clpB2 clpB2 radA radA CVAR_0522 CVAR_0522 CVAR_0557 CVAR_0557 pstB pstB CVAR_0620 CVAR_0620 CVAR_0636 CVAR_0636 ciuD ciuD CVAR_0672 CVAR_0672 CVAR_0673 CVAR_0673 ftsE ftsE CVAR_0749 CVAR_0749 CVAR_0753 CVAR_0753 CVAR_0803 CVAR_0803 CVAR_1047 CVAR_1047 CVAR_1100 CVAR_1100 CVAR_1220 CVAR_1220 CVAR_1348 CVAR_1348 CVAR_1357 CVAR_1357 CVAR_1369 CVAR_1369 CVAR_1380 CVAR_1380 CVAR_1392 CVAR_1392 CVAR_1416 CVAR_1416 arc arc CVAR_1460 CVAR_1460 CVAR_1465 CVAR_1465 CVAR_1470 CVAR_1470 CVAR_1522 CVAR_1522 ruvB ruvB hrpA hrpA gluA gluA recA recA CVAR_1620 CVAR_1620 CVAR_1660 CVAR_1660 CVAR_1669 CVAR_1669 CVAR_1670 CVAR_1670 CVAR_1707 CVAR_1707 uvrA2 uvrA2 CVAR_1806 CVAR_1806 CVAR_1819 CVAR_1819 atpD atpD rho rho CVAR_1896 CVAR_1896 uvrA3 uvrA3 mntB mntB CVAR_2049 CVAR_2049 CVAR_2107 CVAR_2107 CVAR_2192 CVAR_2192 sugA sugA CVAR_2224 CVAR_2224 CVAR_2232 CVAR_2232 CVAR_2233 CVAR_2233 susD susD metN metN CVAR_2306 CVAR_2306 fiuA3 fiuA3 znuC znuC holB holB dnaX dnaX fiuA5 fiuA5 znuC2 znuC2 CVAR_2649 CVAR_2649 CVAR_2660 CVAR_2660 potA potA ntrC ntrC fiuA1 fiuA1 CVAR_2853 CVAR_2853 dnaB dnaB CVAR_3061 CVAR_3061
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnaAChromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (564 aa)
tauAABC-type spermidine/putrescine transport systems, ATPase components. (267 aa)
CVAR_0095Hypothetical protein; ABC-type antimicrobial peptide transport system, ATPase component. (255 aa)
CVAR_0105Putative membrane protein; ABC-type multidrug transport system, ATPase and permease components. (601 aa)
CVAR_0106Putative membrane protein; ABC-type multidrug transport system, ATPase and permease components. (623 aa)
CVAR_0110Hypothetical protein; ATPase components of ABC transporters with duplicated ATPase domains. (557 aa)
CVAR_0141Hypothetical protein; ABC-type spermidine/putrescine transport systems, ATPase components. (314 aa)
CVAR_0145Hypothetical protein; ABC-type antimicrobial peptide transport system, ATPase component. (208 aa)
CVAR_0157Hypothetical protein; ABC-type spermidine/putrescine transport systems, ATPase components. (243 aa)
CVAR_0167Hypothetical protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. (580 aa)
CVAR_0185ABC-type multidrug transport system, ATPase and permease components. (537 aa)
CVAR_0186ABC-type multidrug transport system, ATPase and permease components. (509 aa)
CVAR_0228Putative membrane protein; ABC-type multidrug transport system, ATPase and permease components. (541 aa)
fiuA2ABC-type sugar transport systems, ATPase components. (277 aa)
CVAR_0294ABC-type oligopeptide transport system, ATPase component. (361 aa)
fiuA4ABC-type sugar transport systems, ATPase components. (279 aa)
clpB1ATP-dependent Clp protease ATP-binding subunit; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (856 aa)
CVAR_0382Hypothetical protein; ABC-type sugar transport systems, ATPase components. (318 aa)
CVAR_0405ABC-type polar amino acid transport system, ATPase component. (252 aa)
CVAR_0435Hypothetical protein; ABC-type sugar transport systems, ATPase components. (328 aa)
CVAR_0450Putative membrane protein; ABC-type multidrug transport system, ATPase and permease components. (536 aa)
ftsHCell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (821 aa)
clpB2ATP-dependent Clp protease ATP-binding subunit; ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. (874 aa)
radADNA repair protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (484 aa)
CVAR_0522ABC-type sugar transport systems, ATPase components. (234 aa)
CVAR_0557Hypothetical protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. (526 aa)
pstBPhosphate uptake system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (258 aa)
CVAR_0620Hypothetical protein; ABC-type sugar transport systems, ATPase components. (358 aa)
CVAR_0636Hypothetical protein; ABC-type sugar transport systems, ATPase components. (296 aa)
ciuDABC-type sugar transport systems, ATPase components. (231 aa)
CVAR_0672Hypothetical protein; Lhr-like helicases. (1636 aa)
CVAR_0673Hypothetical protein; ABC-type antimicrobial peptide transport system, ATPase component. (211 aa)
ftsECell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division. (229 aa)
CVAR_0749ABC-type sugar transport systems, ATPase components. (251 aa)
CVAR_0753Putative membrane protein; ABC-type multidrug transport system, ATPase and permease components. (597 aa)
CVAR_0803Hypothetical protein; ATPase components of ABC transporters with duplicated ATPase domains. (556 aa)
CVAR_1047Hypothetical protein; ABC-type multidrug transport system, ATPase and permease components. (622 aa)
CVAR_1100ABC-type oligopeptide transport system, ATPase component. (264 aa)
CVAR_1220Hypothetical protein; ABC-type polar amino acid transport system, ATPase component. (258 aa)
CVAR_1348DNA replication protein. (240 aa)
CVAR_1357Hypothetical protein; ABC-type sugar transport systems, ATPase components. (242 aa)
CVAR_1369DNA replication protein. (240 aa)
CVAR_1380DNA replication protein. (240 aa)
CVAR_1392DNA replication protein. (240 aa)
CVAR_1416ATP-dependent DNA helicase; Superfamily II RNA helicase. (874 aa)
arcHypothetical protein; ATPases of the AAA+ class. (549 aa)
CVAR_1460Hypothetical protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase. (593 aa)
CVAR_1465ABC-type transport system involved in Fe-S cluster assembly ATP-binding protein; ABC-type oligopeptide transport system, ATPase component. (254 aa)
CVAR_1470Hypothetical protein; ABC-type sugar transport systems, ATPase components. (290 aa)
CVAR_1522Hypothetical protein; ATPase related to the helicase subunit of the Holliday junction resolvase. (439 aa)
ruvBHolliday junction resolvasome helicase subunit B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (365 aa)
hrpAHrpA-like helicases. (1358 aa)
gluAABC-type polar amino acid transport system, ATPase component. (251 aa)
recARecombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (379 aa)
CVAR_1620ABC-type sugar transport systems, ATPase components. (228 aa)
CVAR_1660ABC-type spermidine/putrescine transport systems, ATPase components. (272 aa)
CVAR_1669Hypothetical protein; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member. (639 aa)
CVAR_1670Hypothetical protein; Superfamily I DNA and RNA helicases and helicase subunits. (653 aa)
CVAR_1707Hypothetical protein; Predicted ATPase with chaperone activity. (418 aa)
uvrA2UvrABC system protein A; Excinuclease ATPase subunit. (789 aa)
CVAR_1806Hypothetical protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase. (525 aa)
CVAR_1819Hypothetical protein; ABC-type spermidine/putrescine transport systems, ATPase components. (295 aa)
atpDATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (482 aa)
rhoTranscription termination factor; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (599 aa)
CVAR_1896DNA replication protein. (247 aa)
uvrA3UvrABC system protein A; Excinuclease ATPase subunit. (848 aa)
mntBABC-type sugar transport systems, ATPase components. (232 aa)
CVAR_2049Hypothetical protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase. (628 aa)
CVAR_2107Hypothetical protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. (639 aa)
CVAR_2192Hypothetical protein; ABC-type sugar transport systems, ATPase components. (338 aa)
sugAABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (346 aa)
CVAR_2224Hypothetical protein; ABC-type sugar transport systems, ATPase components. (255 aa)
CVAR_2232ABC transport system permease protein / ATP-binding protein. (585 aa)
CVAR_2233ABC-type multidrug transport system, ATPase and permease components. (599 aa)
susDSulfate ABC transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (328 aa)
metNMethionine ABC transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (345 aa)
CVAR_2306Hypothetical protein; DNA segregation ATPase FtsK/SpoIIIE and related proteins. (639 aa)
fiuA3ABC-type sugar transport systems, ATPase components. (276 aa)
znuCABC-type sugar transport systems, ATPase components. (258 aa)
holBDNA polymerase III delta subunit; ATPase involved in DNA replication. (430 aa)
dnaXDNA polymerase III, gamma/tau subunits. (893 aa)
fiuA5ABC-type sugar transport systems, ATPase components. (266 aa)
znuC2ABC-type sugar transport systems, ATPase components. (271 aa)
CVAR_2649ABC-type sugar transport systems, ATPase components. (248 aa)
CVAR_2660Hypothetical protein; MoxR-like ATPases. (322 aa)
potAABC transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (383 aa)
ntrCABC-type sugar transport systems, ATPase components. (264 aa)
fiuA1ABC-type sugar transport systems, ATPase components. (289 aa)
CVAR_2853ABC-type multidrug transport system, ATPase and permease components. (587 aa)
dnaBReplicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (540 aa)
CVAR_3061ABC transport system ATP-binding protein. (339 aa)
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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