STRINGSTRING
CVAR_0113 CVAR_0113 CVAR_0135 CVAR_0135 CVAR_0205 CVAR_0205 CVAR_0642 CVAR_0642 fadB3 fadB3 fadB2 fadB2 hisC hisC amiC amiC echA1 echA1 CVAR_2035 CVAR_2035 katG katG aroT aroT echA3 echA3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CVAR_0113FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Uncharacterized NAD(FAD)-dependent dehydrogenases. (408 aa)
CVAR_0135ferredoxin-NAD+ reductase; Uncharacterized NAD(FAD)-dependent dehydrogenases. (393 aa)
CVAR_0205Hypothetical protein; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family. (437 aa)
CVAR_0642Hypothetical protein; Dihydroxynaphthoic acid synthase; Belongs to the enoyl-CoA hydratase/isomerase family. (246 aa)
fadB33-hydroxyacyl-CoA dehydrogenase. (305 aa)
fadB23-hydroxyacyl-CoA dehydrogenase. (304 aa)
hisCHistidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (370 aa)
amiCAmidase; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family. (479 aa)
echA1Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
CVAR_2035Hypothetical protein; Enoyl-CoA hydratase/carnithine racemase. (370 aa)
katGCatalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (748 aa)
aroTAromatic amino acid aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (364 aa)
echA3enoyl-CoA hydratase. (279 aa)
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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