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fadB1 fadB1 fadA1 fadA1 CVAR_0642 CVAR_0642 fadB3 fadB3 pcaF pcaF pcaL pcaL gcdH gcdH fadA2 fadA2 fadB2 fadB2 fadA3 fadA3 CVAR_2035 CVAR_2035 fadA4 fadA4 fadA5 fadA5 echA3 echA3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fadB13-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase. (763 aa)
fadA1Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (411 aa)
CVAR_0642Hypothetical protein; Dihydroxynaphthoic acid synthase; Belongs to the enoyl-CoA hydratase/isomerase family. (246 aa)
fadB33-hydroxyacyl-CoA dehydrogenase. (305 aa)
pcaFAcetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (415 aa)
pcaL3-oxoadipate enol-lactonase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (408 aa)
gcdHAcyl-CoA dehydrogenases. (394 aa)
fadA2Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
fadB23-hydroxyacyl-CoA dehydrogenase. (304 aa)
fadA3Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (438 aa)
CVAR_2035Hypothetical protein; Enoyl-CoA hydratase/carnithine racemase. (370 aa)
fadA4Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
fadA5Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
echA3enoyl-CoA hydratase. (279 aa)
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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