STRINGSTRING
YTM1 YTM1 H6BKM1_EXODN H6BKM1_EXODN H6BL69_EXODN H6BL69_EXODN H6BLC8_EXODN H6BLC8_EXODN H6BLY7_EXODN H6BLY7_EXODN H6BMJ1_EXODN H6BMJ1_EXODN H6BNC5_EXODN H6BNC5_EXODN H6BNL8_EXODN H6BNL8_EXODN NOP7 NOP7 H6BNX9_EXODN H6BNX9_EXODN SPB1 SPB1 H6BPB1_EXODN H6BPB1_EXODN H6BPR7_EXODN H6BPR7_EXODN H6BPU3_EXODN H6BPU3_EXODN H6BQ70_EXODN H6BQ70_EXODN H6BQL1_EXODN H6BQL1_EXODN H6BQZ4_EXODN H6BQZ4_EXODN ERB1 ERB1 H6BR48_EXODN H6BR48_EXODN H6BR72_EXODN H6BR72_EXODN H6BRN1_EXODN H6BRN1_EXODN H6BS66_EXODN H6BS66_EXODN H6BS99_EXODN H6BS99_EXODN H6BSX4_EXODN H6BSX4_EXODN H6BTA9_EXODN H6BTA9_EXODN H6BUA3_EXODN H6BUA3_EXODN H6BUA4_EXODN H6BUA4_EXODN H6BUS3_EXODN H6BUS3_EXODN H6BUT1_EXODN H6BUT1_EXODN H6BV40_EXODN H6BV40_EXODN H6BV54_EXODN H6BV54_EXODN H6BXA4_EXODN H6BXA4_EXODN H6BY18_EXODN H6BY18_EXODN H6BY27_EXODN H6BY27_EXODN H6BYL2_EXODN H6BYL2_EXODN H6BZ51_EXODN H6BZ51_EXODN H6C0A3_EXODN H6C0A3_EXODN H6C1H2_EXODN H6C1H2_EXODN H6C209_EXODN H6C209_EXODN H6C221_EXODN H6C221_EXODN H6C222_EXODN H6C222_EXODN H6C255_EXODN H6C255_EXODN H6C2F4_EXODN H6C2F4_EXODN H6C3A8_EXODN H6C3A8_EXODN H6C4I2_EXODN H6C4I2_EXODN H6C4L1_EXODN H6C4L1_EXODN H6C540_EXODN H6C540_EXODN H6C6F1_EXODN H6C6F1_EXODN H6C6G0_EXODN H6C6G0_EXODN H6C6G8_EXODN H6C6G8_EXODN TIF6 TIF6 H6C7R3_EXODN H6C7R3_EXODN H6C887_EXODN H6C887_EXODN H6C8J2_EXODN H6C8J2_EXODN H6C9G1_EXODN H6C9G1_EXODN H6CBK5_EXODN H6CBK5_EXODN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (459 aa)
H6BKM1_EXODNUncharacterized protein. (390 aa)
H6BL69_EXODNUncharacterized protein. (225 aa)
H6BLC8_EXODNATP-dependent RNA helicase DBP10. (931 aa)
H6BLY7_EXODNATP dependent RNA helicase; Belongs to the DEAD box helicase family. (831 aa)
H6BMJ1_EXODNNucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (574 aa)
H6BNC5_EXODNRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (231 aa)
H6BNL8_EXODNRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (248 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (674 aa)
H6BNX9_EXODNzf-LYAR domain-containing protein. (544 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (835 aa)
H6BPB1_EXODNUncharacterized protein. (389 aa)
H6BPR7_EXODNPurinergic receptor P2Y, G protein-coupled, 11. (449 aa)
H6BPU3_EXODNRibosomal RNA small subunit methyltransferase F; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (717 aa)
H6BQ70_EXODNDEAD box RNA helicase HelA; Belongs to the DEAD box helicase family. (673 aa)
H6BQL1_EXODNDEAD box RNA helicase HelA; Belongs to the DEAD box helicase family. (556 aa)
H6BQZ4_EXODNDNA polymerase phi subunit. (1058 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (810 aa)
H6BR48_EXODNValyl-tRNA synthetase. (388 aa)
H6BR72_EXODNrRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (130 aa)
H6BRN1_EXODNAdenosinetriphosphatase. (813 aa)
H6BS66_EXODNHistone-binding protein RBBP4. (511 aa)
H6BS99_EXODNUncharacterized protein. (281 aa)
H6BSX4_EXODNNUC173 domain-containing protein. (1295 aa)
H6BTA9_EXODNRNA helicase. (651 aa)
H6BUA3_EXODNUncharacterized protein. (361 aa)
H6BUA4_EXODNBrix domain-containing protein. (336 aa)
H6BUS3_EXODN50S ribosomal protein L24e. (198 aa)
H6BUT1_EXODNUncharacterized protein. (784 aa)
H6BV40_EXODNPUM-HD domain-containing protein. (692 aa)
H6BV54_EXODNRRM domain-containing protein. (763 aa)
H6BXA4_EXODNUncharacterized protein. (274 aa)
H6BY18_EXODNUncharacterized protein. (200 aa)
H6BY27_EXODNProtein MAK16; Belongs to the MAK16 family. (321 aa)
H6BYL2_EXODNUncharacterized protein. (443 aa)
H6BZ51_EXODNBrix-domain ribosomal biogenesis protein. (446 aa)
H6C0A3_EXODNUncharacterized protein. (711 aa)
H6C1H2_EXODNNucleolin. (763 aa)
H6C209_EXODNUncharacterized protein. (231 aa)
H6C221_EXODNNucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (688 aa)
H6C222_EXODN60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (189 aa)
H6C255_EXODNC2H2-type domain-containing protein. (111 aa)
H6C2F4_EXODNUncharacterized protein. (712 aa)
H6C3A8_EXODNUncharacterized protein; Belongs to the DEAD box helicase family. (733 aa)
H6C4I2_EXODNRNA helicase. (631 aa)
H6C4L1_EXODNUncharacterized protein. (577 aa)
H6C540_EXODNNucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
H6C6F1_EXODNHistone-binding protein RBBP4. (553 aa)
H6C6G0_EXODNRibosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (429 aa)
H6C6G8_EXODNCBF domain-containing protein. (1057 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (249 aa)
H6C7R3_EXODNUncharacterized protein. (392 aa)
H6C887_EXODNPAZ domain-containing protein. (435 aa)
H6C8J2_EXODNCP-type G domain-containing protein. (552 aa)
H6C9G1_EXODNATP-dependent RNA helicase dbp9. (601 aa)
H6CBK5_EXODNRibosome biogenesis protein n. (261 aa)
Your Current Organism:
Exophiala dermatitidis
NCBI taxonomy Id: 858893
Other names: E. dermatitidis NIH/UT8656, Exophiala dermatitidis NIH 8656, Exophiala dermatitidis NIH/UT8656, Wangiella dermatitidis NIH 8656
Server load: low (14%) [HD]