(17 nodes) Preribosome, large subunit precursor, and Ribosomal protein L10 network (Exophiala dermatitidis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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Your Input:
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (459 aa)
	H6BKM1_EXODN	Uncharacterized protein. (390 aa)
	H6BNL8_EXODN	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (248 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (674 aa)
	H6BPB1_EXODN	Uncharacterized protein. (389 aa)
	H6BPU3_EXODN	Ribosomal RNA small subunit methyltransferase F; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (717 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (810 aa)
	H6BUA4_EXODN	Brix domain-containing protein. (336 aa)
	H6BV54_EXODN	RRM domain-containing protein. (763 aa)
	H6BXA4_EXODN	Uncharacterized protein. (274 aa)
	H6BY27_EXODN	Protein MAK16; Belongs to the MAK16 family. (321 aa)
	H6BZ51_EXODN	Brix-domain ribosomal biogenesis protein. (446 aa)
	H6C0A3_EXODN	Uncharacterized protein. (711 aa)
	H6C221_EXODN	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (688 aa)
	H6C222_EXODN	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (189 aa)
	H6C4I2_EXODN	RNA helicase. (631 aa)
	H6C8J2_EXODN	CP-type G domain-containing protein. (552 aa)

Your Current Organism:

Exophiala dermatitidis

NCBI taxonomy Id: 858893
Other names: E. dermatitidis NIH/UT8656, Exophiala dermatitidis NIH 8656, Exophiala dermatitidis NIH/UT8656, Wangiella dermatitidis NIH 8656

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	H6BKM1_EXODN	H6BR01	H6BKM1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.997
ERB1	H6BNL8_EXODN	H6BR01	H6BNL8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.997
ERB1	H6BPB1_EXODN	H6BR01	H6BPB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.994
ERB1	H6BPU3_EXODN	H6BR01	H6BPU3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal RNA small subunit methyltransferase F; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.997
ERB1	H6BUA4_EXODN	H6BR01	H6BUA4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix domain-containing protein.	0.987
ERB1	H6BV54_EXODN	H6BR01	H6BV54	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RRM domain-containing protein.	0.987
ERB1	H6BXA4_EXODN	H6BR01	H6BXA4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.994
ERB1	H6BY27_EXODN	H6BR01	H6BY27	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16; Belongs to the MAK16 family.	0.969
ERB1	H6BZ51_EXODN	H6BR01	H6BZ51	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix-domain ribosomal biogenesis protein.	0.982
ERB1	H6C0A3_EXODN	H6BR01	H6C0A3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.996
ERB1	H6C221_EXODN	H6BR01	H6C221	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.993
ERB1	H6C222_EXODN	H6BR01	H6C222	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.992
ERB1	H6C4I2_EXODN	H6BR01	H6C4I2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA helicase.	0.998
ERB1	H6C8J2_EXODN	H6BR01	H6C8J2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	CP-type G domain-containing protein.	0.999
ERB1	NOP7	H6BR01	H6BNQ9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	YTM1	H6BR01	H6BK06	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
H6BKM1_EXODN	ERB1	H6BKM1	H6BR01	Uncharacterized protein.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.997
H6BKM1_EXODN	H6BNL8_EXODN	H6BKM1	H6BNL8	Uncharacterized protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.991
H6BKM1_EXODN	H6BPB1_EXODN	H6BKM1	H6BPB1	Uncharacterized protein.	Uncharacterized protein.	0.995
H6BKM1_EXODN	H6BPU3_EXODN	H6BKM1	H6BPU3	Uncharacterized protein.	Ribosomal RNA small subunit methyltransferase F; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.995

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