STRINGSTRING
H6BKE9_EXODN H6BKE9_EXODN H6BL70_EXODN H6BL70_EXODN H6BN93_EXODN H6BN93_EXODN H6BNK9_EXODN H6BNK9_EXODN H6BNM7_EXODN H6BNM7_EXODN H6BQN2_EXODN H6BQN2_EXODN H6BS10_EXODN H6BS10_EXODN H6BSN4_EXODN H6BSN4_EXODN H6BT33_EXODN H6BT33_EXODN H6BVD3_EXODN H6BVD3_EXODN H6BVF1_EXODN H6BVF1_EXODN H6BVL0_EXODN H6BVL0_EXODN H6BXV0_EXODN H6BXV0_EXODN H6BYI9_EXODN H6BYI9_EXODN H6BYJ0_EXODN H6BYJ0_EXODN H6C0C5_EXODN H6C0C5_EXODN H6C285_EXODN H6C285_EXODN H6C2R1_EXODN H6C2R1_EXODN H6C2R8_EXODN H6C2R8_EXODN H6C3C2_EXODN H6C3C2_EXODN H6C3K8_EXODN H6C3K8_EXODN H6C5D5_EXODN H6C5D5_EXODN H6CAA1_EXODN H6CAA1_EXODN H6CB84_EXODN H6CB84_EXODN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H6BKE9_EXODNSmall nuclear ribonucleoprotein Sm D2. (100 aa)
H6BL70_EXODNSmall nuclear ribonucleoprotein B and B. (227 aa)
H6BN93_EXODNU2 small nuclear ribonucleoprotein B'. (256 aa)
H6BNK9_EXODNU1 small nuclear ribonucleoprotein 70kDa. (377 aa)
H6BNM7_EXODNSmall nuclear ribonucleoprotein Sm D3. (116 aa)
H6BQN2_EXODNUncharacterized protein. (555 aa)
H6BS10_EXODNSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
H6BSN4_EXODNMatrin-type domain-containing protein. (527 aa)
H6BT33_EXODNPSP domain-containing protein. (594 aa)
H6BVD3_EXODNUncharacterized protein. (1216 aa)
H6BVF1_EXODNMatrin-type domain-containing protein. (236 aa)
H6BVL0_EXODNU2 small nuclear ribonucleoprotein A. (253 aa)
H6BXV0_EXODNSmall nuclear ribonucleoprotein F. (93 aa)
H6BYI9_EXODNUncharacterized protein. (853 aa)
H6BYJ0_EXODNNucleolin. (345 aa)
H6C0C5_EXODNPre-mRNA-splicing factor rse1. (1210 aa)
H6C285_EXODNU2 snRNP component prp10. (1211 aa)
H6C2R1_EXODNSplicing factor subunit; Belongs to the SF3B5 family. (85 aa)
H6C2R8_EXODNU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (185 aa)
H6C3C2_EXODNSmall nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (130 aa)
H6C3K8_EXODNPre-mRNA-splicing factor ini1. (110 aa)
H6C5D5_EXODNSmall nuclear ribonucleoprotein G. (80 aa)
H6CAA1_EXODNRRM domain-containing protein. (116 aa)
H6CB84_EXODNNuclear cap-binding protein subunit 2. (166 aa)
Your Current Organism:
Exophiala dermatitidis
NCBI taxonomy Id: 858893
Other names: E. dermatitidis NIH/UT8656, Exophiala dermatitidis NIH 8656, Exophiala dermatitidis NIH/UT8656, Wangiella dermatitidis NIH 8656
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