47 items (Exophiala dermatitidis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H6C513_EXODN	18S rRNA biogenesis protein RCL1. (405 aa)
	H6CBD6_EXODN	Uncharacterized protein. (932 aa)
	H6CAH8_EXODN	Uncharacterized protein. (589 aa)
	H6C9Y8_EXODN	WD_REPEATS_REGION domain-containing protein. (555 aa)
	H6C9W2_EXODN	Uncharacterized protein. (223 aa)
	H6C9T6_EXODN	NUC153 domain-containing protein. (726 aa)
	H6C9C4_EXODN	Utp12 domain-containing protein. (916 aa)
	H6C9C0_EXODN	Pyruvate dehydrogenase E1 component subunit beta. (825 aa)
	H6C969_EXODN	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (391 aa)
	H6C922_EXODN	Uncharacterized protein. (527 aa)
	H6C8Z3_EXODN	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	H6C8Z1_EXODN	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	H6C8V4_EXODN	Ca2+/calmodulin-dependent protein kinase. (971 aa)
	H6C7F0_EXODN	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	H6C6K9_EXODN	Uncharacterized protein. (897 aa)
	H6C5A7_EXODN	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
	H6C414_EXODN	Bms1-type G domain-containing protein. (1182 aa)
	H6C305_EXODN	ATP-dependent RNA helicase. (898 aa)
	H6C2U3_EXODN	Protein kinase. (533 aa)
	H6C1H2_EXODN	Nucleolin. (763 aa)
	H6BZF3_EXODN	Adenosinetriphosphatase. (1294 aa)
	H6BYZ3_EXODN	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
	H6BYE7_EXODN	Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (193 aa)
	H6BY35_EXODN	Fcf2 domain-containing protein. (227 aa)
	H6BY10_EXODN	Uncharacterized protein. (298 aa)
	H6BWP7_EXODN	Ribonuclease P. (527 aa)
	H6BWP5_EXODN	Kri1_C domain-containing protein. (649 aa)
	H6BU40_EXODN	Uncharacterized protein. (388 aa)
	H6BTY7_EXODN	Uncharacterized protein. (303 aa)
	H6BT66_EXODN	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (337 aa)
	H6BSS0_EXODN	Sas10 domain-containing protein. (639 aa)
	H6BSL2_EXODN	CBF domain-containing protein. (291 aa)
	H6BSG4_EXODN	Periodic tryptophan protein 2. (890 aa)
	H6BSE6_EXODN	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (204 aa)
	H6BQ91_EXODN	ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (480 aa)
	H6BQ06_EXODN	Uncharacterized protein. (411 aa)
	H6BPY6_EXODN	WD_REPEATS_REGION domain-containing protein. (451 aa)
	H6BPS7_EXODN	Nop domain-containing protein. (643 aa)
	H6BNC5_EXODN	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (231 aa)
	H6BN84_EXODN	30S ribosomal protein S1. (1811 aa)
	H6BN57_EXODN	rRNA-processing protein FCF1. (195 aa)
	H6BMR1_EXODN	WD_REPEATS_REGION domain-containing protein. (984 aa)
	H6BM68_EXODN	WD_REPEATS_REGION domain-containing protein. (594 aa)
	H6BM64_EXODN	WD_REPEATS_REGION domain-containing protein. (937 aa)
	H6BLK3_EXODN	Uncharacterized protein. (273 aa)
	H6BLI0_EXODN	Pre-rRNA-processing protein PNO1. (270 aa)
	H6BL29_EXODN	RIO kinase 2. (401 aa)

Your Current Organism:

Exophiala dermatitidis

NCBI taxonomy Id: 858893
Other names: E. dermatitidis NIH/UT8656, Exophiala dermatitidis NIH 8656, Exophiala dermatitidis NIH/UT8656, Wangiella dermatitidis NIH 8656

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H6BL29_EXODN	H6BLI0_EXODN	H6BL29	H6BLI0	RIO kinase 2.	Pre-rRNA-processing protein PNO1.	0.998
H6BL29_EXODN	H6BLK3_EXODN	H6BL29	H6BLK3	RIO kinase 2.	Uncharacterized protein.	0.927
H6BL29_EXODN	H6BM64_EXODN	H6BL29	H6BM64	RIO kinase 2.	WD_REPEATS_REGION domain-containing protein.	0.595
H6BL29_EXODN	H6BM68_EXODN	H6BL29	H6BM68	RIO kinase 2.	WD_REPEATS_REGION domain-containing protein.	0.436
H6BL29_EXODN	H6BMR1_EXODN	H6BL29	H6BMR1	RIO kinase 2.	WD_REPEATS_REGION domain-containing protein.	0.465
H6BL29_EXODN	H6BN57_EXODN	H6BL29	H6BN57	RIO kinase 2.	rRNA-processing protein FCF1.	0.554
H6BL29_EXODN	H6BN84_EXODN	H6BL29	H6BN84	RIO kinase 2.	30S ribosomal protein S1.	0.573
H6BL29_EXODN	H6BNC5_EXODN	H6BL29	H6BNC5	RIO kinase 2.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.543
H6BL29_EXODN	H6BPS7_EXODN	H6BL29	H6BPS7	RIO kinase 2.	Nop domain-containing protein.	0.517
H6BL29_EXODN	H6BPY6_EXODN	H6BL29	H6BPY6	RIO kinase 2.	WD_REPEATS_REGION domain-containing protein.	0.424
H6BL29_EXODN	H6BQ06_EXODN	H6BL29	H6BQ06	RIO kinase 2.	Uncharacterized protein.	0.840
H6BL29_EXODN	H6BQ91_EXODN	H6BL29	H6BQ91	RIO kinase 2.	ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family.	0.593
H6BL29_EXODN	H6BSE6_EXODN	H6BL29	H6BSE6	RIO kinase 2.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.965
H6BL29_EXODN	H6BSG4_EXODN	H6BL29	H6BSG4	RIO kinase 2.	Periodic tryptophan protein 2.	0.673
H6BL29_EXODN	H6BSL2_EXODN	H6BL29	H6BSL2	RIO kinase 2.	CBF domain-containing protein.	0.686
H6BL29_EXODN	H6BSS0_EXODN	H6BL29	H6BSS0	RIO kinase 2.	Sas10 domain-containing protein.	0.624
H6BL29_EXODN	H6BT66_EXODN	H6BL29	H6BT66	RIO kinase 2.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.995
H6BL29_EXODN	H6BTY7_EXODN	H6BL29	H6BTY7	RIO kinase 2.	Uncharacterized protein.	0.947
H6BL29_EXODN	H6BU40_EXODN	H6BL29	H6BU40	RIO kinase 2.	Uncharacterized protein.	0.641
H6BL29_EXODN	H6BWP5_EXODN	H6BL29	H6BWP5	RIO kinase 2.	Kri1_C domain-containing protein.	0.457

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