46 items (Exophiala dermatitidis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	H6BWP5_EXODN	Kri1_C domain-containing protein. (649 aa)
	H6BWN8_EXODN	Exosome complex exonuclease RRP40. (245 aa)
	H6BUA4_EXODN	Brix domain-containing protein. (336 aa)
	H6C9Y8_EXODN	WD_REPEATS_REGION domain-containing protein. (555 aa)
	H6CAD7_EXODN	Exoribonuclease like to ribonuclease PH. (291 aa)
	H6CBD6_EXODN	Uncharacterized protein. (932 aa)
	H6BKS2_EXODN	Uncharacterized protein. (1211 aa)
	H6BKZ5_EXODN	Uncharacterized protein; Belongs to the RNR ribonuclease family. (1006 aa)
	H6BLI0_EXODN	Pre-rRNA-processing protein PNO1. (270 aa)
	H6BLK3_EXODN	Uncharacterized protein. (273 aa)
	H6BM68_EXODN	WD_REPEATS_REGION domain-containing protein. (594 aa)
	H6BMZ5_EXODN	Uncharacterized protein. (226 aa)
	H6BMZ6_EXODN	Uncharacterized protein. (249 aa)
	H6BN57_EXODN	rRNA-processing protein FCF1. (195 aa)
	H6BN84_EXODN	30S ribosomal protein S1. (1811 aa)
	H6BUA3_EXODN	Uncharacterized protein. (361 aa)
	H6BNC5_EXODN	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (231 aa)
	H6BNL1_EXODN	Exosome complex subunit Csl4. (245 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (674 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (835 aa)
	H6BPI2_EXODN	RNase_PH domain-containing protein. (271 aa)
	H6BPS7_EXODN	Nop domain-containing protein. (643 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (810 aa)
	H6BSG4_EXODN	Periodic tryptophan protein 2. (890 aa)
	H6BSL2_EXODN	CBF domain-containing protein. (291 aa)
	H6BT66_EXODN	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (337 aa)
	H6BKS1_EXODN	Sec2p domain-containing protein. (290 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (459 aa)
	H6C922_EXODN	Uncharacterized protein. (527 aa)
	H6C8V4_EXODN	Ca2+/calmodulin-dependent protein kinase. (971 aa)
	H6C8B1_EXODN	3' exoribonuclease. (387 aa)
	H6C815_EXODN	RAI1 domain-containing protein. (403 aa)
	H6C7R4_EXODN	Exonuclease. (810 aa)
	H6C697_EXODN	3' exoribonuclease. (354 aa)
	H6C513_EXODN	18S rRNA biogenesis protein RCL1. (405 aa)
	H6C1W0_EXODN	RNA-binding protein Rrp4 and like protein. (353 aa)
	H6C1H2_EXODN	Nucleolin. (763 aa)
	H6C1E7_EXODN	Uncharacterized protein. (319 aa)
	H6BZ51_EXODN	Brix-domain ribosomal biogenesis protein. (446 aa)
	H6BZ22_EXODN	RNase_PH domain-containing protein. (259 aa)
	H6BYZ3_EXODN	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
	H6BY43_EXODN	Uncharacterized protein. (600 aa)
	H6BY35_EXODN	Fcf2 domain-containing protein. (227 aa)
	H6BY27_EXODN	Protein MAK16; Belongs to the MAK16 family. (321 aa)
	H6BXF2_EXODN	Exosome complex exonuclease Rrp6. (820 aa)
	H6BWP7_EXODN	Ribonuclease P. (527 aa)

Your Current Organism:

Exophiala dermatitidis

NCBI taxonomy Id: 858893
Other names: E. dermatitidis NIH/UT8656, Exophiala dermatitidis NIH 8656, Exophiala dermatitidis NIH/UT8656, Wangiella dermatitidis NIH 8656

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	H6BKS2_EXODN	H6BR01	H6BKS2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.761
ERB1	H6BLI0_EXODN	H6BR01	H6BLI0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pre-rRNA-processing protein PNO1.	0.761
ERB1	H6BM68_EXODN	H6BR01	H6BM68	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.871
ERB1	H6BMZ5_EXODN	H6BR01	H6BMZ5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.786
ERB1	H6BMZ6_EXODN	H6BR01	H6BMZ6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.788
ERB1	H6BN84_EXODN	H6BR01	H6BN84	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	30S ribosomal protein S1.	0.944
ERB1	H6BNC5_EXODN	H6BR01	H6BNC5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.869
ERB1	H6BPS7_EXODN	H6BR01	H6BPS7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nop domain-containing protein.	0.985
ERB1	H6BSG4_EXODN	H6BR01	H6BSG4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Periodic tryptophan protein 2.	0.909
ERB1	H6BSL2_EXODN	H6BR01	H6BSL2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	CBF domain-containing protein.	0.889
ERB1	H6BT66_EXODN	H6BR01	H6BT66	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.691
ERB1	H6BUA3_EXODN	H6BR01	H6BUA3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.980
ERB1	H6BUA4_EXODN	H6BR01	H6BUA4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix domain-containing protein.	0.987
ERB1	H6BWP5_EXODN	H6BR01	H6BWP5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Kri1_C domain-containing protein.	0.552
ERB1	H6BY27_EXODN	H6BR01	H6BY27	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16; Belongs to the MAK16 family.	0.969
ERB1	H6BZ51_EXODN	H6BR01	H6BZ51	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix-domain ribosomal biogenesis protein.	0.982
ERB1	H6C1H2_EXODN	H6BR01	H6C1H2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolin.	0.889
ERB1	H6C513_EXODN	H6BR01	H6C513	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	18S rRNA biogenesis protein RCL1.	0.710
ERB1	H6C8V4_EXODN	H6BR01	H6C8V4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ca2+/calmodulin-dependent protein kinase.	0.934
ERB1	H6C922_EXODN	H6BR01	H6C922	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.918

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