41 items (Exophiala dermatitidis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	H6C1N4_EXODN	Fibrillarin-like pre-rRNA processing protein. (321 aa)
	H6C478_EXODN	U3 small nucleolar RNA-associated protein 22. (1139 aa)
	H6C4M6_EXODN	HAD_SAK_1 domain-containing protein. (623 aa)
	H6C5A7_EXODN	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
	H6C7U2_EXODN	S4 RNA-binding domain-containing protein. (188 aa)
	H6C8V4_EXODN	Ca2+/calmodulin-dependent protein kinase. (971 aa)
	H6C8Y5_EXODN	Uncharacterized protein. (1030 aa)
	H6C9G2_EXODN	WD_REPEATS_REGION domain-containing protein. (593 aa)
	H6C9T6_EXODN	NUC153 domain-containing protein. (726 aa)
	H6C9Y8_EXODN	WD_REPEATS_REGION domain-containing protein. (555 aa)
	H6CAI2_EXODN	DRIM domain-containing protein. (2595 aa)
	H6CBD6_EXODN	Uncharacterized protein. (932 aa)
	H6CBX3_EXODN	Brix-domain ribosomal biogenesis protein. (296 aa)
	H6BLT7_EXODN	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (262 aa)
	H6BM64_EXODN	WD_REPEATS_REGION domain-containing protein. (937 aa)
	H6BM68_EXODN	WD_REPEATS_REGION domain-containing protein. (594 aa)
	H6BMN6_EXODN	RNA helicase. (864 aa)
	H6BMR1_EXODN	WD_REPEATS_REGION domain-containing protein. (984 aa)
	H6BN57_EXODN	rRNA-processing protein FCF1. (195 aa)
	H6BN84_EXODN	30S ribosomal protein S1. (1811 aa)
	H6BPC4_EXODN	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (280 aa)
	H6BPH0_EXODN	Nop domain-containing protein. (518 aa)
	H6BPS7_EXODN	Nop domain-containing protein. (643 aa)
	H6BPY6_EXODN	WD_REPEATS_REGION domain-containing protein. (451 aa)
	H6BQ06_EXODN	Uncharacterized protein. (411 aa)
	H6BQ91_EXODN	ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (480 aa)
	H6BQR2_EXODN	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (204 aa)
	H6BRF1_EXODN	Uncharacterized protein. (920 aa)
	H6BS14_EXODN	Uncharacterized protein. (340 aa)
	H6BSG4_EXODN	Periodic tryptophan protein 2. (890 aa)
	H6BSL2_EXODN	CBF domain-containing protein. (291 aa)
	H6BSS0_EXODN	Sas10 domain-containing protein. (639 aa)
	H6BT66_EXODN	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (337 aa)
	H6BU40_EXODN	Uncharacterized protein. (388 aa)
	H6BVC1_EXODN	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (462 aa)
	H6BWY4_EXODN	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (730 aa)
	H6BZF3_EXODN	Adenosinetriphosphatase. (1294 aa)
	H6C0C9_EXODN	WD_REPEATS_REGION domain-containing protein. (982 aa)
	H6C1H2_EXODN	Nucleolin. (763 aa)
	H6C1M5_EXODN	HMG box domain-containing protein. (294 aa)
	H6C2U3_EXODN	Protein kinase. (533 aa)

Your Current Organism:

Exophiala dermatitidis

NCBI taxonomy Id: 858893
Other names: E. dermatitidis NIH/UT8656, Exophiala dermatitidis NIH 8656, Exophiala dermatitidis NIH/UT8656, Wangiella dermatitidis NIH 8656

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H6BLT7_EXODN	H6BM64_EXODN	H6BLT7	H6BM64	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	WD_REPEATS_REGION domain-containing protein.	0.839
H6BLT7_EXODN	H6BM68_EXODN	H6BLT7	H6BM68	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	WD_REPEATS_REGION domain-containing protein.	0.744
H6BLT7_EXODN	H6BMN6_EXODN	H6BLT7	H6BMN6	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	RNA helicase.	0.616
H6BLT7_EXODN	H6BMR1_EXODN	H6BLT7	H6BMR1	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	WD_REPEATS_REGION domain-containing protein.	0.744
H6BLT7_EXODN	H6BN57_EXODN	H6BLT7	H6BN57	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	rRNA-processing protein FCF1.	0.987
H6BLT7_EXODN	H6BN84_EXODN	H6BLT7	H6BN84	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	30S ribosomal protein S1.	0.999
H6BLT7_EXODN	H6BPC4_EXODN	H6BLT7	H6BPC4	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.985
H6BLT7_EXODN	H6BPH0_EXODN	H6BLT7	H6BPH0	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Nop domain-containing protein.	0.895
H6BLT7_EXODN	H6BPS7_EXODN	H6BLT7	H6BPS7	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Nop domain-containing protein.	0.881
H6BLT7_EXODN	H6BPY6_EXODN	H6BLT7	H6BPY6	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	WD_REPEATS_REGION domain-containing protein.	0.990
H6BLT7_EXODN	H6BQ06_EXODN	H6BLT7	H6BQ06	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.691
H6BLT7_EXODN	H6BQ91_EXODN	H6BLT7	H6BQ91	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family.	0.986
H6BLT7_EXODN	H6BQR2_EXODN	H6BLT7	H6BQR2	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
H6BLT7_EXODN	H6BRF1_EXODN	H6BLT7	H6BRF1	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.988
H6BLT7_EXODN	H6BS14_EXODN	H6BLT7	H6BS14	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.801
H6BLT7_EXODN	H6BSG4_EXODN	H6BLT7	H6BSG4	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Periodic tryptophan protein 2.	0.753
H6BLT7_EXODN	H6BSL2_EXODN	H6BLT7	H6BSL2	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	CBF domain-containing protein.	0.982
H6BLT7_EXODN	H6BSS0_EXODN	H6BLT7	H6BSS0	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Sas10 domain-containing protein.	0.985
H6BLT7_EXODN	H6BT66_EXODN	H6BLT7	H6BT66	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.992
H6BLT7_EXODN	H6BU40_EXODN	H6BLT7	H6BU40	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.773

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