STRINGSTRING
H6C0D7_EXODN H6C0D7_EXODN H6C0C5_EXODN H6C0C5_EXODN H6BZ10_EXODN H6BZ10_EXODN H6BYX3_EXODN H6BYX3_EXODN H6BYJ0_EXODN H6BYJ0_EXODN H6BXV0_EXODN H6BXV0_EXODN H6BXI5_EXODN H6BXI5_EXODN H6BXH4_EXODN H6BXH4_EXODN H6BXC0_EXODN H6BXC0_EXODN H6BWY9_EXODN H6BWY9_EXODN H6BVL0_EXODN H6BVL0_EXODN H6BVF1_EXODN H6BVF1_EXODN LSM8 LSM8 H6BUB9_EXODN H6BUB9_EXODN H6BT33_EXODN H6BT33_EXODN H6BS10_EXODN H6BS10_EXODN H6BQN2_EXODN H6BQN2_EXODN H6BQ72_EXODN H6BQ72_EXODN H6BPX8_EXODN H6BPX8_EXODN H6BNK9_EXODN H6BNK9_EXODN H6BNJ0_EXODN H6BNJ0_EXODN H6BN93_EXODN H6BN93_EXODN LSM5 LSM5 H6BM57_EXODN H6BM57_EXODN H6BLP4_EXODN H6BLP4_EXODN H6BL70_EXODN H6BL70_EXODN H6BKS7_EXODN H6BKS7_EXODN H6BKE9_EXODN H6BKE9_EXODN H6BKA8_EXODN H6BKA8_EXODN LSM3 LSM3 H6C8Z2_EXODN H6C8Z2_EXODN H6C3A3_EXODN H6C3A3_EXODN H6C970_EXODN H6C970_EXODN LSM4 LSM4 H6CAA1_EXODN H6CAA1_EXODN H6CAG9_EXODN H6CAG9_EXODN H6CBL5_EXODN H6CBL5_EXODN H6C3C2_EXODN H6C3C2_EXODN H6C3K8_EXODN H6C3K8_EXODN H6C518_EXODN H6C518_EXODN H6C562_EXODN H6C562_EXODN H6C5A7_EXODN H6C5A7_EXODN H6C5D5_EXODN H6C5D5_EXODN H6C7B7_EXODN H6C7B7_EXODN H6C7E0_EXODN H6C7E0_EXODN H6C7Z1_EXODN H6C7Z1_EXODN H6C843_EXODN H6C843_EXODN H6C8X8_EXODN H6C8X8_EXODN H6C2U5_EXODN H6C2U5_EXODN H6C2R8_EXODN H6C2R8_EXODN H6C2R1_EXODN H6C2R1_EXODN H6C285_EXODN H6C285_EXODN H6C1H2_EXODN H6C1H2_EXODN H6C143_EXODN H6C143_EXODN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H6C0D7_EXODNSmall nuclear ribonucleoprotein. (138 aa)
H6C0C5_EXODNPre-mRNA-splicing factor rse1. (1210 aa)
H6BZ10_EXODNPre-mRNA-processing-splicing factor 8. (2360 aa)
H6BYX3_EXODNUncharacterized protein. (156 aa)
H6BYJ0_EXODNNucleolin. (345 aa)
H6BXV0_EXODNSmall nuclear ribonucleoprotein F. (93 aa)
H6BXI5_EXODNUncharacterized protein. (781 aa)
H6BXH4_EXODNUncharacterized protein. (322 aa)
H6BXC0_EXODNUncharacterized protein. (379 aa)
H6BWY9_EXODNNop domain-containing protein. (606 aa)
H6BVL0_EXODNU2 small nuclear ribonucleoprotein A. (253 aa)
H6BVF1_EXODNMatrin-type domain-containing protein. (236 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
H6BUB9_EXODNGYF domain-containing protein. (459 aa)
H6BT33_EXODNPSP domain-containing protein. (594 aa)
H6BS10_EXODNSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
H6BQN2_EXODNUncharacterized protein. (555 aa)
H6BQ72_EXODNC2H2-type domain-containing protein. (217 aa)
H6BPX8_EXODNUncharacterized protein. (598 aa)
H6BNK9_EXODNU1 small nuclear ribonucleoprotein 70kDa. (377 aa)
H6BNJ0_EXODNUncharacterized protein. (561 aa)
H6BN93_EXODNU2 small nuclear ribonucleoprotein B'. (256 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (84 aa)
H6BM57_EXODNU6 snRNA-associated Sm-like protein LSm6. (80 aa)
H6BLP4_EXODNUncharacterized protein. (1678 aa)
H6BL70_EXODNSmall nuclear ribonucleoprotein B and B. (227 aa)
H6BKS7_EXODNSpliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
H6BKE9_EXODNSmall nuclear ribonucleoprotein Sm D2. (100 aa)
H6BKA8_EXODNU2 small nuclear ribonucleoprotein B'. (200 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (104 aa)
H6C8Z2_EXODNUncharacterized protein. (419 aa)
H6C3A3_EXODNUncharacterized protein. (502 aa)
H6C970_EXODNUncharacterized protein. (945 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (135 aa)
H6CAA1_EXODNRRM domain-containing protein. (116 aa)
H6CAG9_EXODNUncharacterized protein. (293 aa)
H6CBL5_EXODNCID domain-containing protein. (964 aa)
H6C3C2_EXODNSmall nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (130 aa)
H6C3K8_EXODNPre-mRNA-splicing factor ini1. (110 aa)
H6C518_EXODNUncharacterized protein. (2223 aa)
H6C562_EXODNElongation factor EF-2. (986 aa)
H6C5A7_EXODNRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
H6C5D5_EXODNSmall nuclear ribonucleoprotein G. (80 aa)
H6C7B7_EXODNPre-mRNA-processing factor 4. (502 aa)
H6C7E0_EXODNU6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
H6C7Z1_EXODNRRM domain-containing protein. (370 aa)
H6C843_EXODNUncharacterized protein. (673 aa)
H6C8X8_EXODNUncharacterized protein. (812 aa)
H6C2U5_EXODNNucleolin, variant. (1283 aa)
H6C2R8_EXODNU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (185 aa)
H6C2R1_EXODNSplicing factor subunit; Belongs to the SF3B5 family. (85 aa)
H6C285_EXODNU2 snRNP component prp10. (1211 aa)
H6C1H2_EXODNNucleolin. (763 aa)
H6C143_EXODNSFM domain-containing protein. (431 aa)
Your Current Organism:
Exophiala dermatitidis
NCBI taxonomy Id: 858893
Other names: E. dermatitidis NIH/UT8656, Exophiala dermatitidis NIH 8656, Exophiala dermatitidis NIH/UT8656, Wangiella dermatitidis NIH 8656
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