(10 nodes) Bacterial secretion system, and Type IV secretion system, VirB10/TrbI network (Helicobacter pylori)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HP_0522	Cag pathogenicity island protein (cag3); Similar to GP:1800159 percent identity: 98.13; identified by sequence similarity; putative. (481 aa)
	HP_0524	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative. (748 aa)
	HP_0525	virB11 homolog; Part of the Type IV secretion system. Belongs to the GSP E family. (330 aa)
	HP_0526	Cag pathogenicity island protein (cag6); Similar to GP:1800163 percent identity: 97.49; identified by sequence similarity; putative. (199 aa)
	HP_0527	Cag pathogenicity island protein (cag7); Similar to GP:1800165 percent identity: 94.57; identified by sequence similarity; putative. (1927 aa)
	HP_0528	Cag pathogenicity island protein (cag8); Similar to GP:1800166 percent identity: 99.04; identified by sequence similarity; putative. (522 aa)
	HP_0530	Cag pathogenicity island protein (cag10); Similar to GP:1800168 percent identity: 98.41; identified by sequence similarity; putative. (252 aa)
	cagT	Cag pathogenicity island protein (cag12); Similar to GP:1752681 percent identity: 98.93; identified by sequence similarity; putative. (280 aa)
	HP_0537	Cag pathogenicity island protein (cag16); Similar to GP:1752689 percent identity: 98.94; identified by sequence similarity; putative. (376 aa)
	cagE	Cag pathogenicity island protein (cag23); Involved in DNA transfer. Required for induction of IL-8 in gastric epithelial cells. (983 aa)

Your Current Organism:

Helicobacter pylori

NCBI taxonomy Id: 85962
Other names: H. pylori 26695, Helicobacter pylori (strain 26695), Helicobacter pylori 26695, Helicobacter pylori ATCC 700392, Helicobacter pylori KE26695, Helicobacter pylori str. 26695, Helicobacter pylori strain 26695

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HP_0522	HP_0524	HP_0522	HP_0524	Cag pathogenicity island protein (cag3); Similar to GP:1800159 percent identity: 98.13; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.	0.649
HP_0522	HP_0527	HP_0522	HP_0527	Cag pathogenicity island protein (cag3); Similar to GP:1800159 percent identity: 98.13; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag7); Similar to GP:1800165 percent identity: 94.57; identified by sequence similarity; putative.	0.925
HP_0522	HP_0528	HP_0522	HP_0528	Cag pathogenicity island protein (cag3); Similar to GP:1800159 percent identity: 98.13; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag8); Similar to GP:1800166 percent identity: 99.04; identified by sequence similarity; putative.	0.931
HP_0522	HP_0537	HP_0522	HP_0537	Cag pathogenicity island protein (cag3); Similar to GP:1800159 percent identity: 98.13; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag16); Similar to GP:1752689 percent identity: 98.94; identified by sequence similarity; putative.	0.933
HP_0522	cagT	HP_0522	HP_0532	Cag pathogenicity island protein (cag3); Similar to GP:1800159 percent identity: 98.13; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag12); Similar to GP:1752681 percent identity: 98.93; identified by sequence similarity; putative.	0.911
HP_0524	HP_0522	HP_0524	HP_0522	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag3); Similar to GP:1800159 percent identity: 98.13; identified by sequence similarity; putative.	0.649
HP_0524	HP_0525	HP_0524	HP_0525	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.	virB11 homolog; Part of the Type IV secretion system. Belongs to the GSP E family.	0.973
HP_0524	HP_0526	HP_0524	HP_0526	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag6); Similar to GP:1800163 percent identity: 97.49; identified by sequence similarity; putative.	0.991
HP_0524	HP_0527	HP_0524	HP_0527	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag7); Similar to GP:1800165 percent identity: 94.57; identified by sequence similarity; putative.	0.973
HP_0524	HP_0528	HP_0524	HP_0528	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag8); Similar to GP:1800166 percent identity: 99.04; identified by sequence similarity; putative.	0.895
HP_0524	HP_0530	HP_0524	HP_0530	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag10); Similar to GP:1800168 percent identity: 98.41; identified by sequence similarity; putative.	0.735
HP_0524	cagE	HP_0524	HP_0544	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag23); Involved in DNA transfer. Required for induction of IL-8 in gastric epithelial cells.	0.888
HP_0524	cagT	HP_0524	HP_0532	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.	Cag pathogenicity island protein (cag12); Similar to GP:1752681 percent identity: 98.93; identified by sequence similarity; putative.	0.706
HP_0525	HP_0524	HP_0525	HP_0524	virB11 homolog; Part of the Type IV secretion system. Belongs to the GSP E family.	Cag pathogenicity island protein (cag5); Similar to GP:1800161 percent identity: 99.06; identified by sequence similarity; putative.	0.973
HP_0525	HP_0526	HP_0525	HP_0526	virB11 homolog; Part of the Type IV secretion system. Belongs to the GSP E family.	Cag pathogenicity island protein (cag6); Similar to GP:1800163 percent identity: 97.49; identified by sequence similarity; putative.	0.808
HP_0525	HP_0527	HP_0525	HP_0527	virB11 homolog; Part of the Type IV secretion system. Belongs to the GSP E family.	Cag pathogenicity island protein (cag7); Similar to GP:1800165 percent identity: 94.57; identified by sequence similarity; putative.	0.971
HP_0525	HP_0528	HP_0525	HP_0528	virB11 homolog; Part of the Type IV secretion system. Belongs to the GSP E family.	Cag pathogenicity island protein (cag8); Similar to GP:1800166 percent identity: 99.04; identified by sequence similarity; putative.	0.913
HP_0525	HP_0530	HP_0525	HP_0530	virB11 homolog; Part of the Type IV secretion system. Belongs to the GSP E family.	Cag pathogenicity island protein (cag10); Similar to GP:1800168 percent identity: 98.41; identified by sequence similarity; putative.	0.835
HP_0525	cagE	HP_0525	HP_0544	virB11 homolog; Part of the Type IV secretion system. Belongs to the GSP E family.	Cag pathogenicity island protein (cag23); Involved in DNA transfer. Required for induction of IL-8 in gastric epithelial cells.	0.922
HP_0525	cagT	HP_0525	HP_0532	virB11 homolog; Part of the Type IV secretion system. Belongs to the GSP E family.	Cag pathogenicity island protein (cag12); Similar to GP:1752681 percent identity: 98.93; identified by sequence similarity; putative.	0.597

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