(5 nodes) RecQ zinc-binding, and RNA helicase, DEAD-box type, Q motif network (Kibdelosporangium phytohabitans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALG06019.1	Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	ALG07491.1	Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (700 aa)
	ALG10774.1	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. (580 aa)
	ALG12594.1	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)
	ALG12837.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)

Your Current Organism:

Kibdelosporangium phytohabitans

NCBI taxonomy Id: 860235
Other names: CCTCC AA 2010001, K. phytohabitans, KCTC 19775, Kibdelosporangium phytohabitans Xing et al. 2012

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALG06019.1	ALG07491.1	AOZ06_02975	AOZ06_11710	Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
ALG06019.1	ALG12594.1	AOZ06_02975	AOZ06_42180	Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
ALG06019.1	ALG12837.1	AOZ06_02975	AOZ06_43630	Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
ALG07491.1	ALG06019.1	AOZ06_11710	AOZ06_02975	Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
ALG07491.1	ALG10774.1	AOZ06_11710	AOZ06_31270	Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.	0.927
ALG07491.1	ALG12594.1	AOZ06_11710	AOZ06_42180	Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
ALG07491.1	ALG12837.1	AOZ06_11710	AOZ06_43630	Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.515
ALG10774.1	ALG07491.1	AOZ06_31270	AOZ06_11710	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.	Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
ALG10774.1	ALG12594.1	AOZ06_31270	AOZ06_42180	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
ALG12594.1	ALG06019.1	AOZ06_42180	AOZ06_02975	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
ALG12594.1	ALG07491.1	AOZ06_42180	AOZ06_11710	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
ALG12594.1	ALG10774.1	AOZ06_42180	AOZ06_31270	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.	0.939
ALG12594.1	ALG12837.1	AOZ06_42180	AOZ06_43630	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.515
ALG12837.1	ALG06019.1	AOZ06_43630	AOZ06_02975	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
ALG12837.1	ALG07491.1	AOZ06_43630	AOZ06_11710	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.515
ALG12837.1	ALG12594.1	AOZ06_43630	AOZ06_42180	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.515