19 items (Bacillus subtilis natto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMK70836.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
	AMK70837.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (336 aa)
	feuB	Ferrichrome ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (334 aa)
	feuA	Iron-uptake system-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	ybbB	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
	yclN	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (316 aa)
	yclO	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (315 aa)
	yclP	Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	yclQ	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	yfiY	Iron siderophore-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	yfiZ	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (333 aa)
	yfhA	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (343 aa)
	AMK71659.1	Iron-dicitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	yusV	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
	fecE	Iron-dicitrate transporter ATP-binding subunit; Part of the FecBCDE citrate-dependent iron (III) transport system; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
	fhuG	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (336 aa)
	fhuB	Ferrichrome ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (348 aa)
	fhuD	Iron(3+)-hydroxamate-binding protein fhuD; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	yxeB	Iron(3+)-hydroxamate-binding protein yxeB; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)

Your Current Organism:

Bacillus subtilis natto

NCBI taxonomy Id: 86029
Other names: B. subtilis subsp. natto, Bacillus subtilis subsp. natto, Bacillus subtilis var. natto

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMK70836.1	AMK70837.1	AWV81_01040	AWV81_01045	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.981
AMK70836.1	feuA	AWV81_01040	AWV81_01055	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-uptake system-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
AMK70836.1	feuB	AWV81_01040	AWV81_01050	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferrichrome ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.907
AMK70836.1	ybbB	AWV81_01040	AWV81_01060	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.769
AMK70837.1	AMK70836.1	AWV81_01045	AWV81_01040	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
AMK70837.1	AMK71659.1	AWV81_01045	AWV81_05765	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron-dicitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
AMK70837.1	fecE	AWV81_01045	AWV81_17275	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron-dicitrate transporter ATP-binding subunit; Part of the FecBCDE citrate-dependent iron (III) transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
AMK70837.1	feuA	AWV81_01045	AWV81_01055	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron-uptake system-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
AMK70837.1	feuB	AWV81_01045	AWV81_01050	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Ferrichrome ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.947
AMK70837.1	fhuB	AWV81_01045	AWV81_17285	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Ferrichrome ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.432
AMK70837.1	fhuD	AWV81_01045	AWV81_17290	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron(3+)-hydroxamate-binding protein fhuD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
AMK70837.1	fhuG	AWV81_01045	AWV81_17280	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.426
AMK70837.1	ybbB	AWV81_01045	AWV81_01060	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AMK70837.1	yclN	AWV81_01045	AWV81_02180	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.424
AMK70837.1	yclP	AWV81_01045	AWV81_02190	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
AMK70837.1	yclQ	AWV81_01045	AWV81_02195	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.750
AMK70837.1	yfiY	AWV81_01045	AWV81_04600	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron siderophore-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
AMK70837.1	yusV	AWV81_01045	AWV81_17035	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
AMK70837.1	yxeB	AWV81_01045	AWV81_21150	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron(3+)-hydroxamate-binding protein yxeB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
AMK71659.1	AMK70837.1	AWV81_05765	AWV81_01045	Iron-dicitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.726