5 items (Bacillus subtilis natto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	spoVK	Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	hflX	GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (420 aa)
	ynbB	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
	glnR	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
	glnA	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)

Your Current Organism:

Bacillus subtilis natto

NCBI taxonomy Id: 86029
Other names: B. subtilis subsp. natto, Bacillus subtilis subsp. natto, Bacillus subtilis var. natto

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
glnA	glnR	AWV81_09640	AWV81_09635	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
glnA	hflX	AWV81_09640	AWV81_09625	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	0.466
glnA	spoVK	AWV81_09640	AWV81_09615	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.470
glnA	ynbB	AWV81_09640	AWV81_09630	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
glnR	glnA	AWV81_09635	AWV81_09640	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
glnR	hflX	AWV81_09635	AWV81_09625	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	0.544
glnR	spoVK	AWV81_09635	AWV81_09615	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
glnR	ynbB	AWV81_09635	AWV81_09630	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
hflX	glnA	AWV81_09625	AWV81_09640	GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
hflX	glnR	AWV81_09625	AWV81_09635	GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
hflX	spoVK	AWV81_09625	AWV81_09615	GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
hflX	ynbB	AWV81_09625	AWV81_09630	GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
spoVK	glnA	AWV81_09615	AWV81_09640	Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.470
spoVK	glnR	AWV81_09615	AWV81_09635	Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
spoVK	hflX	AWV81_09615	AWV81_09625	Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	0.550
spoVK	ynbB	AWV81_09615	AWV81_09630	Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.525
ynbB	glnA	AWV81_09630	AWV81_09640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
ynbB	glnR	AWV81_09630	AWV81_09635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
ynbB	hflX	AWV81_09630	AWV81_09625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	0.814
ynbB	spoVK	AWV81_09630	AWV81_09615	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.525