6 items (Bacillus subtilis natto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	yisS	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
	yvaA	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
	yrbE	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
	yulF	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	idh	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively. (344 aa)
	yhjJ	NTD biosynthesis operon oxidoreductase NtdC; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)

Your Current Organism:

Bacillus subtilis natto

NCBI taxonomy Id: 86029
Other names: B. subtilis subsp. natto, Bacillus subtilis subsp. natto, Bacillus subtilis var. natto

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
idh	yisS	AWV81_21195	AWV81_06045	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
idh	yrbE	AWV81_21195	AWV81_14140	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.930
idh	yulF	AWV81_21195	AWV81_16000	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
idh	yvaA	AWV81_21195	AWV81_17405	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
yisS	idh	AWV81_06045	AWV81_21195	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	0.932
yisS	yrbE	AWV81_06045	AWV81_14140	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
yisS	yulF	AWV81_06045	AWV81_16000	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
yisS	yvaA	AWV81_06045	AWV81_17405	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
yrbE	idh	AWV81_14140	AWV81_21195	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	0.930
yrbE	yisS	AWV81_14140	AWV81_06045	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
yrbE	yulF	AWV81_14140	AWV81_16000	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
yrbE	yvaA	AWV81_14140	AWV81_17405	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
yulF	idh	AWV81_16000	AWV81_21195	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	0.935
yulF	yisS	AWV81_16000	AWV81_06045	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
yulF	yrbE	AWV81_16000	AWV81_14140	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
yulF	yvaA	AWV81_16000	AWV81_17405	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
yvaA	idh	AWV81_17405	AWV81_21195	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.	0.990
yvaA	yisS	AWV81_17405	AWV81_06045	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
yvaA	yrbE	AWV81_17405	AWV81_14140	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
yvaA	yulF	AWV81_17405	AWV81_16000	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917